Gene Haur_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0094 
Symbol 
ID5731987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp120426 
End bp121454 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content53% 
IMG OID641277216 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001542874 
Protein GI159896627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCT GGTCTTTGAT TGTTGGCACT TTGTTCGTTG TAGGCTGTAG CGATGCTGCT 
ATGCTTGTTG AAGCTCCCAA ACCTGCTGCG GTGCAGCAAA TCGCGATCGC CACCAGTGCC
CCGACCAGGG TTGTGCCGAC AGCGACTCCA GCACCAAGTG CGACCCCAGC CCCGCCAACT
GAAACACCCG TGCCCCAACC ACCACGGGTC GGAATTCAAG TTGGCCATTG GCAAACCGAA
GATTTACCTG ATGATTTGGC TAAATTTCGC ACTTCAACTG GGGCATTTGT CAATGGGATT
ACCGAATCGG ATGTGAACTT GCCAGTTGCT GAGCAAGTAA AAGCCTTGCT TGAAGCCGAG
GGGATTACGG TCGATCTGTT GCCTGCGACC GTGCCAGTCG CCTACAAAGC CGATGCTTTT
ATCTCGATTC ATGCCGATGG TTCGACCAGC ACCAGCAGTC GCGGCTTCAA AATGGCCACC
CCATGGCGAG CCTCTGAAGC CAGTTTATTA TTGCTCGATA GTTTAGTTAG CGAATATGCC
GCTGGCACTG ATATGCCTCA AGATTCGGCG ATTACCGCCA ATATGCGCGG CTACTATGCC
TTTAGTTGGC GGCGACATCG CAATGCCATC GCCCCAACCA CCCCAGCCGT GATCGTTGAA
ATGGGCTTTT TGACTAATCC CACGGATCGG GCGTTTATGC TCAATCAATC AGATGTAATT
GCTCAGAGCA TCGCCAATGG CTTGCTGCGC TACCTCGAAG TGCGCGATCC CAATGATTTA
GAAGCGCTGC GGGTAATTGA ATATGCGATT CAGCGCCCCA AAACTGCCGA CGTGACCGTG
CATTCAGCAC CCGATGCTGA GTCGCGGGTG TTACATACGC TGGAAGAAGA TCAACGTTTT
ATGCCATTTC GCCAGCGTGA TGGCTGGTAC GAGGGTTTTG TGCGTGGTAG CTCGAATATT
GTTGGCTGGG TGCAAGTCAG CAATATGCAG GGCACAAGCG ACCAACTACC ACCACCAACC
GATCGCTGA
 
Protein sequence
MKRWSLIVGT LFVVGCSDAA MLVEAPKPAA VQQIAIATSA PTRVVPTATP APSATPAPPT 
ETPVPQPPRV GIQVGHWQTE DLPDDLAKFR TSTGAFVNGI TESDVNLPVA EQVKALLEAE
GITVDLLPAT VPVAYKADAF ISIHADGSTS TSSRGFKMAT PWRASEASLL LLDSLVSEYA
AGTDMPQDSA ITANMRGYYA FSWRRHRNAI APTTPAVIVE MGFLTNPTDR AFMLNQSDVI
AQSIANGLLR YLEVRDPNDL EALRVIEYAI QRPKTADVTV HSAPDAESRV LHTLEEDQRF
MPFRQRDGWY EGFVRGSSNI VGWVQVSNMQ GTSDQLPPPT DR