Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0094 |
Symbol | |
ID | 5731987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 120426 |
End bp | 121454 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641277216 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001542874 |
Protein GI | 159896627 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT GGTCTTTGAT TGTTGGCACT TTGTTCGTTG TAGGCTGTAG CGATGCTGCT ATGCTTGTTG AAGCTCCCAA ACCTGCTGCG GTGCAGCAAA TCGCGATCGC CACCAGTGCC CCGACCAGGG TTGTGCCGAC AGCGACTCCA GCACCAAGTG CGACCCCAGC CCCGCCAACT GAAACACCCG TGCCCCAACC ACCACGGGTC GGAATTCAAG TTGGCCATTG GCAAACCGAA GATTTACCTG ATGATTTGGC TAAATTTCGC ACTTCAACTG GGGCATTTGT CAATGGGATT ACCGAATCGG ATGTGAACTT GCCAGTTGCT GAGCAAGTAA AAGCCTTGCT TGAAGCCGAG GGGATTACGG TCGATCTGTT GCCTGCGACC GTGCCAGTCG CCTACAAAGC CGATGCTTTT ATCTCGATTC ATGCCGATGG TTCGACCAGC ACCAGCAGTC GCGGCTTCAA AATGGCCACC CCATGGCGAG CCTCTGAAGC CAGTTTATTA TTGCTCGATA GTTTAGTTAG CGAATATGCC GCTGGCACTG ATATGCCTCA AGATTCGGCG ATTACCGCCA ATATGCGCGG CTACTATGCC TTTAGTTGGC GGCGACATCG CAATGCCATC GCCCCAACCA CCCCAGCCGT GATCGTTGAA ATGGGCTTTT TGACTAATCC CACGGATCGG GCGTTTATGC TCAATCAATC AGATGTAATT GCTCAGAGCA TCGCCAATGG CTTGCTGCGC TACCTCGAAG TGCGCGATCC CAATGATTTA GAAGCGCTGC GGGTAATTGA ATATGCGATT CAGCGCCCCA AAACTGCCGA CGTGACCGTG CATTCAGCAC CCGATGCTGA GTCGCGGGTG TTACATACGC TGGAAGAAGA TCAACGTTTT ATGCCATTTC GCCAGCGTGA TGGCTGGTAC GAGGGTTTTG TGCGTGGTAG CTCGAATATT GTTGGCTGGG TGCAAGTCAG CAATATGCAG GGCACAAGCG ACCAACTACC ACCACCAACC GATCGCTGA
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Protein sequence | MKRWSLIVGT LFVVGCSDAA MLVEAPKPAA VQQIAIATSA PTRVVPTATP APSATPAPPT ETPVPQPPRV GIQVGHWQTE DLPDDLAKFR TSTGAFVNGI TESDVNLPVA EQVKALLEAE GITVDLLPAT VPVAYKADAF ISIHADGSTS TSSRGFKMAT PWRASEASLL LLDSLVSEYA AGTDMPQDSA ITANMRGYYA FSWRRHRNAI APTTPAVIVE MGFLTNPTDR AFMLNQSDVI AQSIANGLLR YLEVRDPNDL EALRVIEYAI QRPKTADVTV HSAPDAESRV LHTLEEDQRF MPFRQRDGWY EGFVRGSSNI VGWVQVSNMQ GTSDQLPPPT DR
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