Gene Haur_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0070 
Symbol 
ID5731943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp91117 
End bp93225 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content51% 
IMG OID641277192 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001542850 
Protein GI159896603 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA TGCACGAATT TAGTCAACAG CCGTTAGTCT TGATCGTCGA TGATCAATCT 
TCAAATCGTT CAATTGTGCG GCGTTATGTT GAAGCGGCGG GTTATCTCGC CGCTGAGGCT
GAGCATGGCG TGGCGGCGTT GGATTTTGTG CGTCAAACGC CGCCAGATGC GATCTTGCTC
GATATTTTTA TGCCTGGCAT TGATGGAATT GAAGTGCTGA AGACGATTCG TGCCCAGCGC
GATCATCATT ATATTCCGAT TATTGTGGTG ACTGCCGCAG CAGAATTGGC GGTGCGCCAA
CAAGCTTATT TTGAGGGAGC CGATGATTTT CTGCTCAAGC CGGTCGATTC GGCGACGCTT
CGCGCCCGTT TGCGGGCGGC AATTCGTTTG AAACATGTGC TTTCGCGGGT TGAGGCCGAG
CGCGAACGTT TTGCCCTGAT CGCCGATATT ACCCGCGATA TCACCCAGAT TGAGTCGATT
TCGGGCATGC TGGCACATGT GGTCGATGTG AGCACCAAAG CTTTACAGGC CGACCATGGC
AATTTGTTTT TGTTGCATGA TGTAGCCGAT GTTGAAATTC TCACAACCGA CGATGGCGTT
TCGCACAATC TTGATCGAGT AAAACGGGTG GTCAAAGAGG GTGCGGCAGG CTATGCCTTG
CGCAGTCGCG AAACCGTGCG GATCACCGAT GTCCATGAAG ATGTGCGTTG GTTGCAGCTT
GATCAATCGG CGGCCAGCGT GCGTTCAGCC TTGATTGTGC CAATTGGCGA TGCCAGTGGG
CCGTTGGGTG TTTTAGCGGT GTATCATAGC GTGGTTGACC ATTTCAGCGC CGATGATCAA
GCCTTGCTCG AATTGATTGC CCACCAAATT ATTGGGCCAA TTCGCCAAGC CCAAATGCGC
GAACAATTGG CGCGTCAAAC CCGCCAGTTG CAATTGGTCA ATAATCTAGC CCAATCGCTC
AGCGCCAATT TGGATCTCGA TTCGCTCTAT CGCAGTATTG AGCAAGAGTT GCAACAAATT
ATGGGGCCAG TTGCAATTGC ATGGTATTCA TATCGCAATG CAATTATTGA TTTGGCCTAT
ACCTCACAGC AACATGCCTT CTGTATGCCC AACGATCAGC AAAGCCTGCA TTTGCTGACC
GAACTTGGCA CGATTACGCG GGTCTATTCG TGTGTTTTAG GCACTGATAC CTTAGTGCCA
ATTACCCAGC AATTGCTCGA TGCAGGTTAT CAAGGCTGTG CCGCAGTGCC ATTGTTGCAT
CAAGCTCGCC TATTGGGTGT GTTGATTATT GCAATCAAGC ATCGTCAAAT TACCAATGAA
GAAGTAGCCT TGCTTGAAAT GGCCCGACCG CATTTTGCCG TAGCATTGGC CAATGCCCAA
ACTGTGGCCG ACCAAGCAGC CCGCCAAACC GAGCAGGCCG AATTGGGCTA TTTGCGCAAT
ATGGCCCAAC TAGCTGGCCA AATGGCTCAT CACTTCAATA ATTTATTGGC GGTGATTTTG
GGCAATACCC AATTGGCCGA GCTTGATGCG ATTGACGAAG GCCAGCGTGA ATTATTGGCC
GAGGTGGTCA AACATGTGCG TGGCGGCAAA GAGATGGTTC AGCGGATTCA TCTGCTCAAA
GGCGCTAGCC GGATTAGTCC TGCGCCATTT CCGATTGATC TCAGTGATGC CTTGCCCAGC
CTAATCGATC AAGCCTTGCA AATTCATCGT TCGGTTGAGC ACTTGCAGCT TGAAATTCAG
CCGAATTTGC ATATTTTATT GCAAGAGCGC GAATTGCTGA CCCTCTGCAC CGAACTGCTC
AATAATGCCT TGGAATCTGG CTCAAGCCAT GCGGGGATTG TGATCAAGGC TTATCAAACT
GAGCATGCGA CGGTTTTGGC GTTTCGTGAT GCTGGACGTG GTATCCCAGT CGAAGCCTTG
GGCGATATTT GGCAACCTTT CTGGACAACC CATGGTCCAC AGCGTTTGGG CTTAGGCTTG
CCAATTTGCG CTGCCGTGAT GTGGCGGGCA TCTGGCTCGA TCAGCTTAAT TCCGAATGAC
CCTGAGCCAG GCATCACCGC GTTGTTGCAA TTTCCCTTAT TGCCCAACGA AGCAGCAAAT
TCGGCCTAG
 
Protein sequence
MTEMHEFSQQ PLVLIVDDQS SNRSIVRRYV EAAGYLAAEA EHGVAALDFV RQTPPDAILL 
DIFMPGIDGI EVLKTIRAQR DHHYIPIIVV TAAAELAVRQ QAYFEGADDF LLKPVDSATL
RARLRAAIRL KHVLSRVEAE RERFALIADI TRDITQIESI SGMLAHVVDV STKALQADHG
NLFLLHDVAD VEILTTDDGV SHNLDRVKRV VKEGAAGYAL RSRETVRITD VHEDVRWLQL
DQSAASVRSA LIVPIGDASG PLGVLAVYHS VVDHFSADDQ ALLELIAHQI IGPIRQAQMR
EQLARQTRQL QLVNNLAQSL SANLDLDSLY RSIEQELQQI MGPVAIAWYS YRNAIIDLAY
TSQQHAFCMP NDQQSLHLLT ELGTITRVYS CVLGTDTLVP ITQQLLDAGY QGCAAVPLLH
QARLLGVLII AIKHRQITNE EVALLEMARP HFAVALANAQ TVADQAARQT EQAELGYLRN
MAQLAGQMAH HFNNLLAVIL GNTQLAELDA IDEGQRELLA EVVKHVRGGK EMVQRIHLLK
GASRISPAPF PIDLSDALPS LIDQALQIHR SVEHLQLEIQ PNLHILLQER ELLTLCTELL
NNALESGSSH AGIVIKAYQT EHATVLAFRD AGRGIPVEAL GDIWQPFWTT HGPQRLGLGL
PICAAVMWRA SGSISLIPND PEPGITALLQ FPLLPNEAAN SA