Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0070 |
Symbol | |
ID | 5731943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 91117 |
End bp | 93225 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641277192 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001542850 |
Protein GI | 159896603 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAA TGCACGAATT TAGTCAACAG CCGTTAGTCT TGATCGTCGA TGATCAATCT TCAAATCGTT CAATTGTGCG GCGTTATGTT GAAGCGGCGG GTTATCTCGC CGCTGAGGCT GAGCATGGCG TGGCGGCGTT GGATTTTGTG CGTCAAACGC CGCCAGATGC GATCTTGCTC GATATTTTTA TGCCTGGCAT TGATGGAATT GAAGTGCTGA AGACGATTCG TGCCCAGCGC GATCATCATT ATATTCCGAT TATTGTGGTG ACTGCCGCAG CAGAATTGGC GGTGCGCCAA CAAGCTTATT TTGAGGGAGC CGATGATTTT CTGCTCAAGC CGGTCGATTC GGCGACGCTT CGCGCCCGTT TGCGGGCGGC AATTCGTTTG AAACATGTGC TTTCGCGGGT TGAGGCCGAG CGCGAACGTT TTGCCCTGAT CGCCGATATT ACCCGCGATA TCACCCAGAT TGAGTCGATT TCGGGCATGC TGGCACATGT GGTCGATGTG AGCACCAAAG CTTTACAGGC CGACCATGGC AATTTGTTTT TGTTGCATGA TGTAGCCGAT GTTGAAATTC TCACAACCGA CGATGGCGTT TCGCACAATC TTGATCGAGT AAAACGGGTG GTCAAAGAGG GTGCGGCAGG CTATGCCTTG CGCAGTCGCG AAACCGTGCG GATCACCGAT GTCCATGAAG ATGTGCGTTG GTTGCAGCTT GATCAATCGG CGGCCAGCGT GCGTTCAGCC TTGATTGTGC CAATTGGCGA TGCCAGTGGG CCGTTGGGTG TTTTAGCGGT GTATCATAGC GTGGTTGACC ATTTCAGCGC CGATGATCAA GCCTTGCTCG AATTGATTGC CCACCAAATT ATTGGGCCAA TTCGCCAAGC CCAAATGCGC GAACAATTGG CGCGTCAAAC CCGCCAGTTG CAATTGGTCA ATAATCTAGC CCAATCGCTC AGCGCCAATT TGGATCTCGA TTCGCTCTAT CGCAGTATTG AGCAAGAGTT GCAACAAATT ATGGGGCCAG TTGCAATTGC ATGGTATTCA TATCGCAATG CAATTATTGA TTTGGCCTAT ACCTCACAGC AACATGCCTT CTGTATGCCC AACGATCAGC AAAGCCTGCA TTTGCTGACC GAACTTGGCA CGATTACGCG GGTCTATTCG TGTGTTTTAG GCACTGATAC CTTAGTGCCA ATTACCCAGC AATTGCTCGA TGCAGGTTAT CAAGGCTGTG CCGCAGTGCC ATTGTTGCAT CAAGCTCGCC TATTGGGTGT GTTGATTATT GCAATCAAGC ATCGTCAAAT TACCAATGAA GAAGTAGCCT TGCTTGAAAT GGCCCGACCG CATTTTGCCG TAGCATTGGC CAATGCCCAA ACTGTGGCCG ACCAAGCAGC CCGCCAAACC GAGCAGGCCG AATTGGGCTA TTTGCGCAAT ATGGCCCAAC TAGCTGGCCA AATGGCTCAT CACTTCAATA ATTTATTGGC GGTGATTTTG GGCAATACCC AATTGGCCGA GCTTGATGCG ATTGACGAAG GCCAGCGTGA ATTATTGGCC GAGGTGGTCA AACATGTGCG TGGCGGCAAA GAGATGGTTC AGCGGATTCA TCTGCTCAAA GGCGCTAGCC GGATTAGTCC TGCGCCATTT CCGATTGATC TCAGTGATGC CTTGCCCAGC CTAATCGATC AAGCCTTGCA AATTCATCGT TCGGTTGAGC ACTTGCAGCT TGAAATTCAG CCGAATTTGC ATATTTTATT GCAAGAGCGC GAATTGCTGA CCCTCTGCAC CGAACTGCTC AATAATGCCT TGGAATCTGG CTCAAGCCAT GCGGGGATTG TGATCAAGGC TTATCAAACT GAGCATGCGA CGGTTTTGGC GTTTCGTGAT GCTGGACGTG GTATCCCAGT CGAAGCCTTG GGCGATATTT GGCAACCTTT CTGGACAACC CATGGTCCAC AGCGTTTGGG CTTAGGCTTG CCAATTTGCG CTGCCGTGAT GTGGCGGGCA TCTGGCTCGA TCAGCTTAAT TCCGAATGAC CCTGAGCCAG GCATCACCGC GTTGTTGCAA TTTCCCTTAT TGCCCAACGA AGCAGCAAAT TCGGCCTAG
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Protein sequence | MTEMHEFSQQ PLVLIVDDQS SNRSIVRRYV EAAGYLAAEA EHGVAALDFV RQTPPDAILL DIFMPGIDGI EVLKTIRAQR DHHYIPIIVV TAAAELAVRQ QAYFEGADDF LLKPVDSATL RARLRAAIRL KHVLSRVEAE RERFALIADI TRDITQIESI SGMLAHVVDV STKALQADHG NLFLLHDVAD VEILTTDDGV SHNLDRVKRV VKEGAAGYAL RSRETVRITD VHEDVRWLQL DQSAASVRSA LIVPIGDASG PLGVLAVYHS VVDHFSADDQ ALLELIAHQI IGPIRQAQMR EQLARQTRQL QLVNNLAQSL SANLDLDSLY RSIEQELQQI MGPVAIAWYS YRNAIIDLAY TSQQHAFCMP NDQQSLHLLT ELGTITRVYS CVLGTDTLVP ITQQLLDAGY QGCAAVPLLH QARLLGVLII AIKHRQITNE EVALLEMARP HFAVALANAQ TVADQAARQT EQAELGYLRN MAQLAGQMAH HFNNLLAVIL GNTQLAELDA IDEGQRELLA EVVKHVRGGK EMVQRIHLLK GASRISPAPF PIDLSDALPS LIDQALQIHR SVEHLQLEIQ PNLHILLQER ELLTLCTELL NNALESGSSH AGIVIKAYQT EHATVLAFRD AGRGIPVEAL GDIWQPFWTT HGPQRLGLGL PICAAVMWRA SGSISLIPND PEPGITALLQ FPLLPNEAAN SA
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