Gene Haur_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0054 
Symbol 
ID5731926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp69559 
End bp70764 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID641277175 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_001542834 
Protein GI159896587 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTC ACCATGTTCG GATTGTACTG CTCGATCAGG ATGGGCAGGC GACGAGGCAG 
ATTACGAGCC TGATCACCGC AATTCAGGCG GTGCGCTATC AGCTTGTGAC CGTTACTGAA
GTGGCTCAAG CGCTTGATAT TTTAGCGACA CAACGGATTG ATGTCGTGAT TGTCGCGCTT
ACAGCCCACG CTGATGAGCT AAATTGGCTT CAAACAATCC GTTTGAAGGC TCCCATTTGC
CCTGTGATTG TATATGCTGA AGATACTGAT GAGTCGATTG CCTTGCATGC GCTGCATAGC
GGTGCTCATG ATTATGTCTT AGCCAGTGAC CTTAGCCCAA GTGTCTTTCA ACGAACCATT
CGTTATGCCC GAGCGATTGT TGCTCAAAGC GTGGCCGAAC AACAAGTCCA AGCATTGACC
TTGGCCTTAG CCACCGCCAT GAGCGCAGCC CAGCAGCTTG AACAAAACCT TGATGTAGCG
ATTCATGAAA TTCAAACCCC GCTGAGTATT TTGCTGGGCT ATATTCAGTT ATTTGAGCGC
CGAGTGGCTA GTTGGGGTGG TATTCCGCTG CGGGAGCGCC AAATGCTCAA TACAATGCGA
TTGCAGACAA TTCATATTAG TCGTTTAGTT GGCATCTTGC TTGATTCAAC TCAGATGGCG
ACCAATTATG GCAAACTTGA GCGGCGGCCA CTGGAGCTTG GAGCTGTGTT GCGGGCAGTT
GTAGCCTCAA TTCAAGGCAT GCGAGCGCCG CATTTGTTGG TATTGCGCCT ACCTGAGGTG
GCAGTATGGA TTGATGGCGA TTATGGGCGA TTAATGCAGA TCTTTCATAA TTTGCTATTG
AATGCCCTGA AATATAGCGA CCTGCATAGT GAAATTACCC TAACCTTGCG AGCCGATGGC
CAGATCTCAG TCCAAGATTA TGGCATTGGC ATTCCCAACA ATGCGCAGCC CCAGATTTTC
AATCCATTTT TTCGGGCAGC CAACGCTCAA CTTCAGGGTG GCACGGGCTA TGGCATTGGC
TTGGCAGTTG TGCAAGATCT GGTTCAACAG CACGATGGCA CGATTACGGT TACCAGCGAG
CTGGGGAGCG GAACCACGAT GACCTTACAA TTTCCCTGCA CGGTTCGCCC AAACCGCTTG
GTCGAACTCC CAACCCTGAT CAATGAGCTT GATGAAGTGC TAATTCGCCA ACGCTCATTG
AGTTGA
 
Protein sequence
MDLHHVRIVL LDQDGQATRQ ITSLITAIQA VRYQLVTVTE VAQALDILAT QRIDVVIVAL 
TAHADELNWL QTIRLKAPIC PVIVYAEDTD ESIALHALHS GAHDYVLASD LSPSVFQRTI
RYARAIVAQS VAEQQVQALT LALATAMSAA QQLEQNLDVA IHEIQTPLSI LLGYIQLFER
RVASWGGIPL RERQMLNTMR LQTIHISRLV GILLDSTQMA TNYGKLERRP LELGAVLRAV
VASIQGMRAP HLLVLRLPEV AVWIDGDYGR LMQIFHNLLL NALKYSDLHS EITLTLRADG
QISVQDYGIG IPNNAQPQIF NPFFRAANAQ LQGGTGYGIG LAVVQDLVQQ HDGTITVTSE
LGSGTTMTLQ FPCTVRPNRL VELPTLINEL DEVLIRQRSL S