Gene Haur_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0010 
Symbol 
ID5736844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp11112 
End bp11777 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID641277131 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_001542790 
Protein GI159896543 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01993] pyrimidine 5'-nucleotidase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.32249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTC GTTTTGCTTT GTACGATTTA GATAACACCC TTTACGCTGA CTCATCGGGG 
CTGATGGAAC AGATTAATGA TCGGATTGGG TTGTTTTTTC AAGAGCATTT ACATTTAGCC
GGCGAGGAAG CCCAACGCTT GCGCCAACAT TATTATGAGC AATATGGCAC AACCTTGGCG
GGCTTACAAA AACACCATGG CGTTGTCGAA ACTGAAGAAT ATTTGGCATT TATTCATCAA
TTAACCCTTG ATGTGCTGTT GCCTGATGAT GGCACGTTGC ATGTTGCGCT CCAAGCCTTG
CCCTTACAAA AAGTGATTTT CACCAACTCG CCGCGTGAAC ATGCGGTGCG CGTGCTCAAT
CGGCTGGGCT TGCACGACCA TTTTGCCCAA ATTTTTGATA TTCGGGCCTT TGAATTTTTG
GCCAAGCCCG ATTTTAGTGC TTACCACACG GTTTTGACTG CGCTGAACGC TCAAGGCCAT
GAATGTGTGT TATTTGAAGA TACCATGGCC AATTTGGCTC CCGCTAAGAG CTTGGGTATG
ACCACAGTGC TGATTGCACC CGCTGACACC CAACATCCCT TTGCTGATAT TATTGTGCCG
AATGTCCTGG CTGGCACCTT GGCCATCCAT GAACGCTGTG GTGTGCCGCT GGATTTGGCG
GCCTAA
 
Protein sequence
MTLRFALYDL DNTLYADSSG LMEQINDRIG LFFQEHLHLA GEEAQRLRQH YYEQYGTTLA 
GLQKHHGVVE TEEYLAFIHQ LTLDVLLPDD GTLHVALQAL PLQKVIFTNS PREHAVRVLN
RLGLHDHFAQ IFDIRAFEFL AKPDFSAYHT VLTALNAQGH ECVLFEDTMA NLAPAKSLGM
TTVLIAPADT QHPFADIIVP NVLAGTLAIH ERCGVPLDLA A