| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4209 |
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| Symbol | |
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| ID | 5714738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | - |
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| Start bp | 56106 |
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| End bp | 57956 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641277104 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_001542400 |
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| Protein GI | 159046732 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG AAGTTCTTGA CCATTATCGC AGTGCCGTGG CGATGCTCGC GCCCCTGCTG
ACCATCCATG TCTTCCTGAG GCTGGTGTTC CTGGCGCTGA TCCTGCCCCT GATCGGGCTG
CTTCTGGCCC TGACCCTGCA ATTCTCGGAC CAGACGGCGC TGACCGACCA GGATATCGCG
CGCTTCCTGC TGACCCCGGC CGGCGCGCTC GGGGCGCTGG TGATCGGGTC GGCCCTGGTG
GCGGCGCTGA TCCTCGATGT GGCGGTGATG ACCGCGACGC TGCGCAGCCG CCGGACCAAT
GCGCTCGGTG CGTTGCGCGA AGGGATCGGA TTCACCCTGT CGAAGGGGCT GGTTCTGGTG
CAGGTGGCGG GGGGGCTCCT GTTGCGGGTG CTGCTGTTGT CGCTGCCGTT TCTGGTGGTG
GGCGGGGGTC TGTTCCTGAC GCAGCTGACC GAGTTCGACA TCAACTACTA CCTGACGGAG
CGGCCGCCGG AGTTCACCCG GACGGTGGTG ATGATCGGCG GCGTCCTCGG GCTGCTGGCG
CTGCTGGTGC TGGAGCGGCT GACGGGCTGG GCGCTGGTGC TGGATATGGT GCTCTTCGAC
CGCCAGCCCA TCGGCACGGC GTTTCGCGAC AGTCGGCGGC TGATGGCGGG GCACAAGCTG
GCGCTGCTGC GCGCCGTCGC GCTGTGGCTG GGGCTGCGGC TGGCGGTGGC GGCGGGGATC
TCGGCGGGGC TGGCCCTGGG GCTGCAGCTG ACCTCGGGGG CGTTCCGGCA GGACCTGACC
ACTGCGGCGC TGGCGGTGAT GGGGGTGATG GTGGTGGCGC TGCTGGCGAC CACGGTGCTC
AATGCGGTGT CGAACGGGGC CTTGGCGGCC TTGCTGAACG ACCTGTTCGA GCGGGCAGGG
GGCGGCACCG AGCACTCCCT CGGGCCGCAG GAGGCCGACG AAGGGCCCCT GGGCGGCAAG
GTGGTCGCGG GGCTCGCCGT GGCGGGGGTG GTCGCGGTCG GGGTGATCGG CGGGGCGGCG
GCCCTGTCGG AGGGTATTCG CGCCGAAACC GAGGTCGCGG TGATCGGCCA TCGGGGGGCG
GCCGGGGCGC GACCCGAGAA CACCATGGCC TCGGTGCTCA AGGCAATCGA GGACGGGGCC
GACTGGGTCG AGATCGACGT GCAGGAGACC TCCGACGGTG CCATCGTGGT CGCCCATGAC
AGCGATTTCA TGAAGGCGGC GGGCAACCCG ATCAAGGTCT GGGACGCCAC GCTGGCGGAC
CTGGCCGAGG TGGATATCGG CAGCTGGTAC GACCCCGCCT ATGCCGGGGA GCGCGTGCCG
CTGTTGCGCG ACGTGCTTCT GGCGGCGAAG GACCGGGCGC GGGTGATCAT CGAGCTTAAG
TATTACGGGC ATGACGTGGA CCTGGAAAAC CGGGTGATTT CCATTGTTGA AGAGACGGAT
ATGGCCGACC AGATTGCGAC CATGTCCCTG AGCTATCCGG CGGTGCAGAA GATGCGCGAC
CTGCGCCCGG ACTGGCGCAC GGGGGTGCTG GCGGCCACGG CGCTGGGGGA CCTGAGCGGG
TTGGAGGGGG ATTTCCTGGC CGTGAGCGTG GCCACGGCCT CTCCGGGGCT GGTGGCGCGG
GCGGAGGACG CGGGCAAGCA GGTCTATGCC TGGACCGTGA ACGACGCCCT GAGCATGTCG
CGGATGATCT CCATGGGGGT GCATGGGCTG ATCACGGACG AGCCGGCCCT GGCGCGGCAG
GTGATCGCGG AGCATGCGGA ACTGCCGGCG ATCGCGCGGC TGGCGCTCTG GGTCAGCGAG
AGCTTCGGCG TGGCGCTGGA TCGGCTGACC GGGGTGGAGG TGACCCAGTG A
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| Protein sequence | MIREVLDHYR SAVAMLAPLL TIHVFLRLVF LALILPLIGL LLALTLQFSD QTALTDQDIA
RFLLTPAGAL GALVIGSALV AALILDVAVM TATLRSRRTN ALGALREGIG FTLSKGLVLV
QVAGGLLLRV LLLSLPFLVV GGGLFLTQLT EFDINYYLTE RPPEFTRTVV MIGGVLGLLA
LLVLERLTGW ALVLDMVLFD RQPIGTAFRD SRRLMAGHKL ALLRAVALWL GLRLAVAAGI
SAGLALGLQL TSGAFRQDLT TAALAVMGVM VVALLATTVL NAVSNGALAA LLNDLFERAG
GGTEHSLGPQ EADEGPLGGK VVAGLAVAGV VAVGVIGGAA ALSEGIRAET EVAVIGHRGA
AGARPENTMA SVLKAIEDGA DWVEIDVQET SDGAIVVAHD SDFMKAAGNP IKVWDATLAD
LAEVDIGSWY DPAYAGERVP LLRDVLLAAK DRARVIIELK YYGHDVDLEN RVISIVEETD
MADQIATMSL SYPAVQKMRD LRPDWRTGVL AATALGDLSG LEGDFLAVSV ATASPGLVAR
AEDAGKQVYA WTVNDALSMS RMISMGVHGL ITDEPALARQ VIAEHAELPA IARLALWVSE
SFGVALDRLT GVEVTQ
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