Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4182 |
Symbol | |
ID | 5714713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 29547 |
End bp | 30521 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641277077 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001542373 |
Protein GI | 159046705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.774704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTCCCC TCCCGGCCCG GGTCCGGGGC GCGGGAACCC TTGGGCGGCT CGCGCGTTGG GCGCGGATGG ACACCGTTGA AGAGATCTTT CCGCAGAACA TCACCGCACA TCTGGTGGCG CAGCTCTCGG GCTGGGCCGA GGGGCTGATC GCCGCCCTGC CGCGCCTCAC GCTCGCGCTG GCGGTAATCC TTGTCACCGC CCTCGTGGTC TGGGCTGTGC GGCGCCTGAT CCAGAGCCTC GGCCGCCGGG CCGGTCTGCG CCGCAACCTG CGCGACGTGC TGGGGATGCT GGCCAATACG GGTCTGTGGC TGGCCGGGCT GTTGCTGGCG CTCACCATCG TCTTTCCGTC GATCACCCCG GGCCGCGCGC TCACCACGCT GGGCCTGGGC TCGGTCGCGA TCGGGTTCGC CTTCAAGGAC ACGCTGGAGA ACTTCCTCGC CGGCATCCTC ATCCTGCTGC GCGAGCCCTT CACCATCGGG GATCACGTGG ATTGCGAAGG CGCCGAAGGG CAGGTGGAAC AGATCACCAT CCGCGACACC CATATCCGCC AGACCGACGG GCAGCTCGTG GTCGTGCCGA ACGCCATGCT GTTCCACAAC CCGGTGACCG TGCGTACGGA TCAGGAGTTT CGCCGGGCGC GGATCGTCTG CGGCGTCGCT TATGGCGAAG ACGTCGATGC CGCCCGCAAG GTGATCGAGG ACGCGGTGCG CGAGGTGGAC ATGGTGCGCA ACGATGTGCG CGACATCCAG GTCTTTGCCA TGGCCTTCGG CGCGTCATCC ATCGATTTCG AGATCACCTG GTGGACCGGC TCCGCCCCGG TGGATATCCG CGCCAGCCGG GACCAGGTCG TGGCCGCGGT CAAGGGCGCG CTGGATGCCG CGGGCATCGA GATCCCCTTC CCCTATCGCA CGCTGACCTT GCAGGGCGAC GCCCTGCCGG TGCAGGTGAT GAAGGGCCGG AACGCCGCGG AATAG
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Protein sequence | MVPLPARVRG AGTLGRLARW ARMDTVEEIF PQNITAHLVA QLSGWAEGLI AALPRLTLAL AVILVTALVV WAVRRLIQSL GRRAGLRRNL RDVLGMLANT GLWLAGLLLA LTIVFPSITP GRALTTLGLG SVAIGFAFKD TLENFLAGIL ILLREPFTIG DHVDCEGAEG QVEQITIRDT HIRQTDGQLV VVPNAMLFHN PVTVRTDQEF RRARIVCGVA YGEDVDAARK VIEDAVREVD MVRNDVRDIQ VFAMAFGASS IDFEITWWTG SAPVDIRASR DQVVAAVKGA LDAAGIEIPF PYRTLTLQGD ALPVQVMKGR NAAE
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