Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4169 |
Symbol | |
ID | 5714684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 17646 |
End bp | 18203 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641277064 |
Product | cytochrome B561 |
Protein accession | YP_001542360 |
Protein GI | 159046692 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0139606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAG CCGAAACCCG TTATCGCGCC CCGGCCCGGC TGTTTCACTG GGGCATGGCG GTTCTGATCC TCGCCACGAT CCCCGTGGGC GTCGTCATGG TCCAGGAGGG GTTGCCGCGG CCGCTCCAGA ACAGCCTGTT CATCTTTCAC AAGAATGTGG GCGTTCTGCT GCTGCTTCTG GTGCTGGCGC GGCTGGCCTA TCGCCTGTGG CGGCCGCCTG CGCCGCTGCC GCCTTCGGTG ACGGGGATGC AGCGGACCGC CGCGCACCTG TCCCACCTCG CGCTCTATAC ACTTCTGATC GTGATGCCCG TAGCGGGTTA TGTCCGGGTC AAGGCAGGGG GCTTCCCGAT CGAGACCCTC GATGCGCTCG GCGTGCCGTC GCTGGTGCCG CGCTCCGACG CGCTGGCCGA ACTGGCCAAG ACCGTGCACT ACCTCGGCAG CTACGCCATC GCCGCCCTGA TCGCCCTGCA TGTCTGCGCC GCCGCATATC ACGGCATTGC CAAGCGCGAC GGCATCTTTT CGCGCATGTG GCCGCCCTTT GGCGGGACGG TTGACTAG
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Protein sequence | MSQAETRYRA PARLFHWGMA VLILATIPVG VVMVQEGLPR PLQNSLFIFH KNVGVLLLLL VLARLAYRLW RPPAPLPPSV TGMQRTAAHL SHLALYTLLI VMPVAGYVRV KAGGFPIETL DALGVPSLVP RSDALAELAK TVHYLGSYAI AALIALHVCA AAYHGIAKRD GIFSRMWPPF GGTVD
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