Gene Dshi_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4169 
Symbol 
ID5714684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp17646 
End bp18203 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID641277064 
Productcytochrome B561 
Protein accessionYP_001542360 
Protein GI159046692 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0139606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG CCGAAACCCG TTATCGCGCC CCGGCCCGGC TGTTTCACTG GGGCATGGCG 
GTTCTGATCC TCGCCACGAT CCCCGTGGGC GTCGTCATGG TCCAGGAGGG GTTGCCGCGG
CCGCTCCAGA ACAGCCTGTT CATCTTTCAC AAGAATGTGG GCGTTCTGCT GCTGCTTCTG
GTGCTGGCGC GGCTGGCCTA TCGCCTGTGG CGGCCGCCTG CGCCGCTGCC GCCTTCGGTG
ACGGGGATGC AGCGGACCGC CGCGCACCTG TCCCACCTCG CGCTCTATAC ACTTCTGATC
GTGATGCCCG TAGCGGGTTA TGTCCGGGTC AAGGCAGGGG GCTTCCCGAT CGAGACCCTC
GATGCGCTCG GCGTGCCGTC GCTGGTGCCG CGCTCCGACG CGCTGGCCGA ACTGGCCAAG
ACCGTGCACT ACCTCGGCAG CTACGCCATC GCCGCCCTGA TCGCCCTGCA TGTCTGCGCC
GCCGCATATC ACGGCATTGC CAAGCGCGAC GGCATCTTTT CGCGCATGTG GCCGCCCTTT
GGCGGGACGG TTGACTAG
 
Protein sequence
MSQAETRYRA PARLFHWGMA VLILATIPVG VVMVQEGLPR PLQNSLFIFH KNVGVLLLLL 
VLARLAYRLW RPPAPLPPSV TGMQRTAAHL SHLALYTLLI VMPVAGYVRV KAGGFPIETL
DALGVPSLVP RSDALAELAK TVHYLGSYAI AALIALHVCA AAYHGIAKRD GIFSRMWPPF
GGTVD