| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4147 |
|---|
| Symbol | |
|---|
| ID | 5714672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009958 |
|---|
| Strand | - |
|---|
| Start bp | 79830 |
|---|
| End bp | 80822 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641277043 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001542339 |
|---|
| Protein GI | 159046670 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.43533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG CGCGCGCCTC GGCCCCGGGG GCGGTCCCTG TCCTGCCCCT TTCCACCGGC
GCTGCACTGC CCCATGTGCG CATCCTCATG GGCACCTGGG AGGGGGGCGC CCATCTGCGC
GCGCAGCTCG ACAGTTTCGC GGATCAGACC CATGGCGATT GGTCTCTCTG GGTCTCCGAT
GACGGCTCGC GCGATGACAC CCGCGCGGTG CTCGCGGGTT TCGCAGCGGA CCATTCGACC
CGCGAGATCC GGCTCTTCGA CGGGCCCCGG GCGGGGGCGG CGGCGAATTA CCTGAGCCTG
TTGTCGCGGC CCGAGCTGCC CCGGGACGGG GCGGTGATCG CGCTGTCGGA CCAGGACGAT
GTGTGGATGC CCGACCGGCT GGCCCAGGCG CTGGCCCACC TGGCGCGCCA TCCGGACGAC
CGGCCCGTGC TCTATGCCGC CAACACGGTG CTGACCGACC GGGCCCTGCG CCCGATCCGG
CAGATCGCGC CGCGCGGGGA GGCGCCGGGC TTCGAGAATG CGCTGGTCCA GAACATCGTG
GCGGGCAATA CCGTGGCGCT GAACCCGGCG GCCGCGGCCG TGGCGCGGGG GGCGATCCCA
CCCGGGCCGG TGCCCTATCA CGACTGGTGG CTTTACCTGC TGATCACCGG GGCGGGCGGG
ATCGTAGCCT ATGACCGGGG CCAGCGGCTC TGGTACCGCC AGCACGAGGG CAATGTGCTG
GGTGCCCATC GCGGGGCGCG GGCGGGGCTG CGCCGGGTCC GGCTGATGCT GGACGGCACC
TATGGCGGTT GGCTGCGCGA CAACCTGGCC GCCCTGGAGG CGGTGGCGGC CCACCTGACC
CCGGAGCATG CCGCCCAGGT CGCCCGGCTG CGGGCTGATG CGGGGCGCGG CGGCTGGACG
CGCTGGCGCA GCCTCAAGGC CGCGGGCATC CATCGCAAGA GCTGGTTGGG CACCCTGGCC
CTGGCTGGCC TCGCCATCGC GGGACGGATT TGA
|
|---|
| Protein sequence | MRDARASAPG AVPVLPLSTG AALPHVRILM GTWEGGAHLR AQLDSFADQT HGDWSLWVSD
DGSRDDTRAV LAGFAADHST REIRLFDGPR AGAAANYLSL LSRPELPRDG AVIALSDQDD
VWMPDRLAQA LAHLARHPDD RPVLYAANTV LTDRALRPIR QIAPRGEAPG FENALVQNIV
AGNTVALNPA AAAVARGAIP PGPVPYHDWW LYLLITGAGG IVAYDRGQRL WYRQHEGNVL
GAHRGARAGL RRVRLMLDGT YGGWLRDNLA ALEAVAAHLT PEHAAQVARL RADAGRGGWT
RWRSLKAAGI HRKSWLGTLA LAGLAIAGRI
|
|---|
| |