| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3960 |
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| Symbol | |
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| ID | 5714489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 25401 |
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| End bp | 26003 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641276873 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001542169 |
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| Protein GI | 159046499 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.105512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGCTTT CAGGTCTTCA GAAGGTATTG TGGGTGTTGG CGGGCGCGGC GGCGTTCGTT
TTCATCTGGC TGTTGCTATG GTCCGACTAC CGTGCCGATC TTGCCCGCAC CGAGAGTGAA
CCACCGTTTC TTGCTGATTT CGAACTGACC GATCATCGCG GCATGGTCCA AACGGACGAA
GATTTCGCAG GGCGCTGGAT GCTGGTCTTC TTTGGCTTCA CCAATTGCCC CGACGTCTGT
CCGACAACAC TGTCCGAAGT CGCGGCCGTG ATGGAGGGCC TGGGCGATGA GGCAGCAATG
GTTCAGCCGA TTTTCATAAC GATTGATCCG GAGCGGGATA CGCCGACTGC ACTTGCCGAG
TATGTGCCCC TGTTCGACGC AGGGATCATC GGGCTGACCG GTACACCGGA GCAGATCGCC
GCGACATCCG AAACCTTTCC GATATTCTTT GAGCGGATCG AGCAGGCGAC TGCGCCGGGC
GGATACACGA TGGGTCACAC GTCGCATCTT TTCCTTTTCG ACACGCAAGC AGGCTTCGCG
GACTCCTGGC CCTACGGCAC GCCCGCCGAA GAGATCCTCG CCGATCTGAG ACAGAGGATC
TGA
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| Protein sequence | MRLSGLQKVL WVLAGAAAFV FIWLLLWSDY RADLARTESE PPFLADFELT DHRGMVQTDE
DFAGRWMLVF FGFTNCPDVC PTTLSEVAAV MEGLGDEAAM VQPIFITIDP ERDTPTALAE
YVPLFDAGII GLTGTPEQIA ATSETFPIFF ERIEQATAPG GYTMGHTSHL FLFDTQAGFA
DSWPYGTPAE EILADLRQRI
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