| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3956 |
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| Symbol | |
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| ID | 5714485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 23198 |
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| End bp | 23824 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276869 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001542165 |
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| Protein GI | 159046495 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0454728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTC GGCAGCTCCT TCTATACGGC GCAGCCGGTG CCGGCGTTCT TGGCCTGACG
CTCTTCGTGG GCTGGTGGCG GGTGGACGGG CCCGGTGCGC CTGAACCAAA AGGGCAGCGG
CCCCTGCCCC TATCGGCGAT GGAGTTCCGG CTGACCGACC ACGAGGAAAA TGAGGTAGGG
CCTGGCAACC TGATCGGTCG TCCCACAATG GTGTTTTTCG GGTTCACCTA CTGCCCGGAC
GTCTGCCCGA CGACCCTATC GGATATTTCC GGCTGGCTTG AGGAACTGGG CGACGAAGCA
TCAGAGATGA ACGTGGTCTT CATCACGGTC GACCCGGAGC GGGACACGGT CGAGGCCATG
GCCGAATATG TCGGCTATTT TCATCCGGTC ATTCGTGGCT GGACGGGGCC GGAAGACCAA
ATTGCCCGCG CTGCAGAAGG GTTTCGTGCC TCATTTGAGC GCGTCCCGAC TGAGGGCGGC
GGCTATACGA TGAACCATAC GGCAAGCGTA TTCCTGTTCG ATGCCGAGGG TGAGCTCGTC
ACCATGATCG ACTATCACGA GCAAAGAGAA TTCGCGGTGC CGAAGATCCA GCGCGCACTG
ACAGAAGACG TAGAGGGGGC AACATGA
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| Protein sequence | MQRRQLLLYG AAGAGVLGLT LFVGWWRVDG PGAPEPKGQR PLPLSAMEFR LTDHEENEVG
PGNLIGRPTM VFFGFTYCPD VCPTTLSDIS GWLEELGDEA SEMNVVFITV DPERDTVEAM
AEYVGYFHPV IRGWTGPEDQ IARAAEGFRA SFERVPTEGG GYTMNHTASV FLFDAEGELV
TMIDYHEQRE FAVPKIQRAL TEDVEGAT
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