| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3928 |
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| Symbol | |
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| ID | 5714457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 150931 |
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| End bp | 151857 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641276841 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001542137 |
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| Protein GI | 159046466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.45742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA CCCTTCTGGA TGGCGGTCTC GGGCAGGAGC TCGTGCGGCG CGCCGGGCGT
GCGACGCCGC TGTGGTCGAT GGAGGCATTG CTGAACGCGC CGGACCTGGT GCGCGCGGTG
CATGACGACT TCTTCGCCGC GGGCGCGGAG GTGGCGACGA CCAACACCTA TGCGGTGCTG
CCGGATCGGC TGGCGGCGTT CGACATGGCG GACCAGCTCG CCCCCCTGAC CGAGCGGGCC
TGCGGGATCG CCGCGGCGGC GCGGGATGCG GCGGGCGGCG GGCTGGTGGC GGGGGCGCTG
GGGCCGCTGG GCTTTTCCTA TCAGCCGGAC AAGGCGCCGC CGCCGGAGCA GGCGGCGGAG
ATCTATGCCG AGGTGGCGCG GCTGCAGGCG CGGATCGTCG ATGTGCTGGT ACTGGAGACC
ATGTCGTCGG TCGACCAGGC GCGCGGCGGC ATGATGGGCG CACAGGTGGC GGGAAAGCCG
GTCTGGCTGG CCCTGAGCGT GGACGACGCG GATGGCACGA AGCTGCGCTC CGGCGAGCCG
CTGGCGGCGA TTTCCCCTGT GTTAGAGACG TTTTCGCCCG ACCGGGTGCT GATCAATTGC
GCCCGGCCCG AGGCGGTGTC GCAGGCGATG CCGATCCTGG CGGGGCTACA TCCGCGGATC
GGGGGCTATG CCAACGGGTT CACGCGGATC GAAAGCGGGT TCAACCGGAT CGGGGCCACG
GTGGATTTGC TGCAGGCGCG GCAGGATATC GGGCCCGCCG CCTATGCGGC CTTCGCGCAG
GCCTGGGTGG CGGCGGGGGC GACCACGGTC GGCGGGTGCT GCGAGATCGG GCCTGCCCAT
ATCGAAGAGC TGGCGCGGGT GCTGAAAACC CCTGTGAAAG AGACGATTCC GGCTGGCCTG
TCGGCGCGGG AAGTTGCTCC AGATTAA
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| Protein sequence | MDITLLDGGL GQELVRRAGR ATPLWSMEAL LNAPDLVRAV HDDFFAAGAE VATTNTYAVL
PDRLAAFDMA DQLAPLTERA CGIAAAARDA AGGGLVAGAL GPLGFSYQPD KAPPPEQAAE
IYAEVARLQA RIVDVLVLET MSSVDQARGG MMGAQVAGKP VWLALSVDDA DGTKLRSGEP
LAAISPVLET FSPDRVLINC ARPEAVSQAM PILAGLHPRI GGYANGFTRI ESGFNRIGAT
VDLLQARQDI GPAAYAAFAQ AWVAAGATTV GGCCEIGPAH IEELARVLKT PVKETIPAGL
SAREVAPD
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