Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3894 |
Symbol | |
ID | 5714423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | - |
Start bp | 117901 |
End bp | 118716 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641276807 |
Product | cytochrome c553-like protein |
Protein accession | YP_001542103 |
Protein GI | 159046432 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.299257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCC TCAACAGCCC CTTTGTAATC ACAACCGCTT TCGCCGTTGT CGGTATTGGC GTCTTTGCCC TGAACGCGCA GGACTATGAG ACCGACCCCG GTATCAAGGC GCTGGAAGCA CGGCTGGAAG ACGACAGGGT GCTTTTCAAT GTCGAGGTTC AGCGAGAGGT CACCGATGAC CTGCTGGAAC TGGGCCGACT GGTCGCCATG GGCGGGGCCG AGGCGGGCGG ATCCGGCATG GCGTGCATCG CTTGCCACGG GGCAGAGGGG ATGGGCGACG GGTCCGGCGC TTTTCCGCGC ATCGCCGGGC AATCGGGATG GTACCTCTAC AAACAGCTGA TCGACTACGC CTCCGGCGCG CGGCCCAACA AGGTGATGTC GGGCGTCGCT CAGCGCCTGA CCGAACGCGA GATGGAGGCC GTCTCGGCCC ATTACGCGGC CATTGATGCC CCCTTCCGCC CCGTGATCGG CGATATCGAA CCGGAATTGC TGCAATGGGG CGGACAATTG GGCGCGGTGG GGTCAGCCGA GCGGGGCATC CCTGCATGCG TGAATTGCCA TGGACCCAGC GGCATGGGCA ACCCGCCCTC CGTTCCCTAC CTCGCCGGGC AATACGCCAA TTACATGACC CATCAACTGG AGCTATGGGC AGAGGGCGTG CGCGACAATG ACGCGATGAA CGTGATGTCT TCTATCGCAG AAAAGATGTC GTCCGAAGAC ATGCGCGCCG TCAGTGAATA CTACGCCCGC GTCCGGCCCG CCGGTGCCGG CGCCGAGGTT GCGGTCAACG TCGACATGAC CGTCGACACC GAGTGA
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Protein sequence | MPRLNSPFVI TTAFAVVGIG VFALNAQDYE TDPGIKALEA RLEDDRVLFN VEVQREVTDD LLELGRLVAM GGAEAGGSGM ACIACHGAEG MGDGSGAFPR IAGQSGWYLY KQLIDYASGA RPNKVMSGVA QRLTEREMEA VSAHYAAIDA PFRPVIGDIE PELLQWGGQL GAVGSAERGI PACVNCHGPS GMGNPPSVPY LAGQYANYMT HQLELWAEGV RDNDAMNVMS SIAEKMSSED MRAVSEYYAR VRPAGAGAEV AVNVDMTVDT E
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