| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3802 |
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| Symbol | |
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| ID | 5714331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 10649 |
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| End bp | 11578 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641276717 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001542013 |
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| Protein GI | 159046342 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.238076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.337014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC TGACCCTCAA ACACCTGCGC TATTTCGATG CCCTGGCCCG CACCGGCCAT
TTCGGCCGCG CGGCGGAGGC CTCGGGCATC TCGCAACCGG CCCTGTCCAT GCAGATCAAG
GAGTTGGAGG CGATGCTGGG GGCGCCGCTG GTCGAACGGC GCGCGCGCGA GATCCGGCTG
ACCGGGCTGG GGGAGGACCT GCGCCTGCGG GCGCGCAAGA TCCTGGCCGA GATCGGGGAG
CTGGACGAGC TTGTGCGGTC CCGCGACGGG CCGCTGGTCG GGCGGCTGCG GATCGGGGTG
ATTCCCACCG TCGCCCCCTA TTTCCTGCCC CAGGTGATCC GGGCGCTGGC CCTTCGGATG
CCCGCGATCG AGTTGCAGCC GCGCGAGACG GTGACCGAGA CGCTGATTGC GGAGCTGCTC
GATTCGCGGC TGGACGCGGC GCTGGTGGCC CTGCCGATCT CGGAGCCGGA CTTGCGGGAA
TTCGCGCTCT TTTCCGAGGA TTTCGTGCTG GTGCGCGCCG CCGACGAGGC GGACCAGCCG
GTCCCCAGCC CCGAGCGGCT GAAGGAGATG CGGCTCCTGC TGCTGGAGGA AGGGCATTGT
TTCCGCGACC AGGCCCTGAG TTTCTGCGAT ATCTCCGTGG GCGAGCCGCG CTACATGATG
GAGGGCAGCT CGCTCTCGAC CCTGGTGCAG ATGGTTGGCG CGGGCATGGG GCTGACCCTG
ATCCCGGAGA TGGCGGTGCC GCTGGACACC GCCCGCGCCG AGGTGTCGGT CGCCCGTTTC
GAGCCGCCCG CGCCGTCGCG CACCATCGGC ATGGTCTGGC GCAAGACCAA CCCCCTGGCC
GCGCAACTGG CCGAGATCGG CGCGACCCTG CGCCAGGCCG GGGCGGTGGC CGATGCGGGG
TTTTCCGCGC CGCGTGGTCC GATCGGATGA
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| Protein sequence | MKGLTLKHLR YFDALARTGH FGRAAEASGI SQPALSMQIK ELEAMLGAPL VERRAREIRL
TGLGEDLRLR ARKILAEIGE LDELVRSRDG PLVGRLRIGV IPTVAPYFLP QVIRALALRM
PAIELQPRET VTETLIAELL DSRLDAALVA LPISEPDLRE FALFSEDFVL VRAADEADQP
VPSPERLKEM RLLLLEEGHC FRDQALSFCD ISVGEPRYMM EGSSLSTLVQ MVGAGMGLTL
IPEMAVPLDT ARAEVSVARF EPPAPSRTIG MVWRKTNPLA AQLAEIGATL RQAGAVADAG
FSAPRGPIG
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