| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3722 |
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| Symbol | |
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| ID | 5714251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 128919 |
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| End bp | 130454 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641276638 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001541934 |
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| Protein GI | 159046262 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC TAGGTCGTTC CCTGATCGCA AGTGCTGCCC GCGATCCGGA TGCGCTGGCC
ATTGTCGATG GCGATGTACG TCTGAGTTAT GCCGATTGGC TGCGCCAGAT TTCGGCGCTT
GTCCAAGGGC TTGCGGACAT GGGCCTGCGC CATGGCGACC GGTTGGTGAC GGCTATGCAG
AACAACCATG CCGCCGCAAG CATCCACTGG GCCTGCCAAA TGGCCGGCAT CACGATCGTT
CCGGTGAACT GGCGGGCGAC AGCCGACGAA ATCACATTCT TTACCGAGAA CAGCGGCGCC
CGCGCCATTG CCTGTGACGG ATCGAGCGTG GATGCCGTGC GTGCTTCAGC AACAGATCTG
CCGTGCCTGA CATACGAAAC CGATGTCGAC GGCGCGGTCA GGTTCGAGGA TGTCGTCGCC
GGTTCGGCAC CGGACGCAAG CCCAAAGGCC AGCGCCGACG ATTGGTCCAT CATGCTCTAT
ACCAGCGGCA CCACCGCCCG GCCCAAAGGC GTGCCGCGCC GCCACCGTGC CGAACGGGCG
GGGACATTGG CGCATGTGGC GCAGAACCTG ATGCCGATGA ACGACGCAAC GCTGGGGGTC
ATGCCGCTTT ATCATACGAT GGGGGTGCGT TCGCTTCTGG CGATGACATT GCTGAACGGC
ACCTTCGTCT GCCTGCCCCG GTTCAACTGT GCCGATGCTC TGGGGCTGAT CGCCGATGAA
CGGATCGGAA GCCTGTATCT GGTTCCGACG CTCTATCACG ACCTGCTCGA ACACCCCGAC
TTTGCGTCAA CGGACCTTTC CGCTGTCAAA CGCCTGGGGT TTGCCGGGGC GTCGATGACG
GACGGGTTGC TCAAACGGGT TCAGGCCGCG TTTCAGCCGG AGCTTTTCGT GAACCATTAC
GGCTCGTCCG AGATCTACAC CTTCTCGATC GAACAGGACG CCGTGTCCAA ACCCGGTTCC
GCAGGCAAGG CGGGACTCAA TCAGGATTTG CGCGTGGTCA GGATGGGCGC GGGCGATCCC
GCTGCCGTGA TGGCACAGGG CGAAGAAGGC GAAATCATCG CGACACTCGC CGGAGACGAA
GCCTTTGAAG GTTACTGGCA ACGCCCGGAC GCGAACGAAA AATCGCTACG CGATGGATGG
TACTTTACCG GCGATTGCGG GCATTTCGAC GCCGAGGGCG ATCTGTACGT GACGGGCCGC
GTCGACGACA TGATCATCAC CGGTGGCGAA AACGTGTCGC CCGTCGAGGT GGAAAGCTGC
CTGTCGATGC ACCCGGCGGT CGAGGATTGC GCCGCCGTGG GTCTGCCCGA TGAACGCTGG
GGCAAGATCG TCACCGCCTT TGTCAAACGC CGCCACGCCG TGAGCACCGA GGAACTGGAC
GCGCATTGCC GCGACTCGGC ATTGGCCAAT TTCAAACGGC CCCGCCGGAT CATTTTCGTG
TCCGAGCTTC CCAAATCGCC GGTTGGCAAA TTGCTGCGCC GGGAACTGGT GGCCGGAAAT
TACACCCCCG AACCCGAAGA GACCGCGGCC GGATAA
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| Protein sequence | MLDLGRSLIA SAARDPDALA IVDGDVRLSY ADWLRQISAL VQGLADMGLR HGDRLVTAMQ
NNHAAASIHW ACQMAGITIV PVNWRATADE ITFFTENSGA RAIACDGSSV DAVRASATDL
PCLTYETDVD GAVRFEDVVA GSAPDASPKA SADDWSIMLY TSGTTARPKG VPRRHRAERA
GTLAHVAQNL MPMNDATLGV MPLYHTMGVR SLLAMTLLNG TFVCLPRFNC ADALGLIADE
RIGSLYLVPT LYHDLLEHPD FASTDLSAVK RLGFAGASMT DGLLKRVQAA FQPELFVNHY
GSSEIYTFSI EQDAVSKPGS AGKAGLNQDL RVVRMGAGDP AAVMAQGEEG EIIATLAGDE
AFEGYWQRPD ANEKSLRDGW YFTGDCGHFD AEGDLYVTGR VDDMIITGGE NVSPVEVESC
LSMHPAVEDC AAVGLPDERW GKIVTAFVKR RHAVSTEELD AHCRDSALAN FKRPRRIIFV
SELPKSPVGK LLRRELVAGN YTPEPEETAA G
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