Gene Dshi_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3685 
Symbol 
ID5714215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp90129 
End bp90698 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content56% 
IMG OID641276603 
ProductBioY protein 
Protein accessionYP_001541899 
Protein GI159046227 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC GTGATACCGT CTTTATCGCA CTCTTCGCGG CCATCATGGC CGCGCTGGCA 
GTCTTCCCGC CGATTACCCT ACCCGTTGTC GGCGTTCCGA TCACCGCTCA ATCTCTAGGC
GCCATGCTCG CTGGCGGCGT TTTGGGAGCC ACACGCGGTG GCTTGTCGAT TATTTTGTTC
CTTTTGCTCG TTGCAATCGG GCTTCCTCTG CTCCCAGGAG GCCGTGGGGG TTTTGGTGTC
TTCCTTGGCC CGACAGGGGG ATATTTGATT GGCTGGATCT TCACCGCCTT TGTGGTTGGT
TTCCTTGTGG AGCGCTTCTG GCATCAGCTT AGCTACATCA ACGCCTTCTT GGCGTCGGTG
GCGGGGGGAA TAGTCGTACT TTATGCAATT GGTATTCCCT GGAGCGCGTT CGTCGCCCAA
ATCTCTGTTT GGGCCGCGTT CGTCGGTTCC CTCCCGTTCT TCATCGGTGA TATTGTTAAA
TGTCTCATCG CGGCAGCCGT GATCGTGATT GTTAAGAAGT CTTATCCGAT CATCACGCCC
AGAAAGCGCC AGGCCGCTAC GACCGAGTAG
 
Protein sequence
METRDTVFIA LFAAIMAALA VFPPITLPVV GVPITAQSLG AMLAGGVLGA TRGGLSIILF 
LLLVAIGLPL LPGGRGGFGV FLGPTGGYLI GWIFTAFVVG FLVERFWHQL SYINAFLASV
AGGIVVLYAI GIPWSAFVAQ ISVWAAFVGS LPFFIGDIVK CLIAAAVIVI VKKSYPIITP
RKRQAATTE