Gene Cmaq_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_2001 
Symbol 
ID5708588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2075885 
End bp2076736 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content46% 
IMG OID641276510 
Producthypothetical protein 
Protein accessionYP_001541806 
Protein GI159042554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA CCAACGCCGT AGTATCATTA GCCGTGGCAG GCTTCACGGT ATCATGGGCA 
TCAATACTAA TAATTTGGAG TGGGGTAAAC CCCATTGCTG TATCCTTCTG GAGGACTACA
CTGGCTTCAT TAGCCTTAAC ACCACTCATG ATTAGGGACT TGAGGAGAAA TGGCCTAAAC
ATACCCCTTA GGCTAATTGC ATTAAGTGGT CTTGCCTTAG CCATACACTT CATGACCTGG
ATAACATCAC TATACTACAC CACAGTAGCC ATGAGCGTTA CCATAGTCTC CACCTACTCA
GTATTCACAA TACCCATTAC CATAGCCCTT GGGAGGAGGG TTAACGCATT AACAGTGATT
GGGGCCTCCC TAGCCTTAAC TGGTGTAGCA GCCATGATGT ACTCATCCTA CGGCTTAAAC
ACAGGTAGCC TAATGGGTGA TTTATTAGCC TTAGCTGGAT CCATCTCTGG AGCATTCTAC
TTCACCATTG GTGAATTAGC CAGGGTTAAG GCATCAACCC CAGTTTACTC AACACTAGTC
TACGCATCAG CAGCATTATT CACAGTACCC GCTGCGTTAC TAATGGGGGT TAACTTAACC
CTACCCAGCT TTAAGTCACT GGTTATGATT TCCTTAATAG TGGCTGGACC CATGTTGATG
GGTCACACAT TACTGAACTA CTCCCTGAAA TACCTCCCAG CCACCGCTGT GTCGACGGTA
ACCCTGGTTG AGCCAGTGGG TTCAACGGTG TTAGCTTACC TACTCCTACA CCAGTCAGTG
GGTTTAATTG AAGCGTTATC AATGACTGTG ACTTTAATTG GGGTTTACTT ATCGATAAGG
GGTGGATTAT GA
 
Protein sequence
MGKTNAVVSL AVAGFTVSWA SILIIWSGVN PIAVSFWRTT LASLALTPLM IRDLRRNGLN 
IPLRLIALSG LALAIHFMTW ITSLYYTTVA MSVTIVSTYS VFTIPITIAL GRRVNALTVI
GASLALTGVA AMMYSSYGLN TGSLMGDLLA LAGSISGAFY FTIGELARVK ASTPVYSTLV
YASAALFTVP AALLMGVNLT LPSFKSLVMI SLIVAGPMLM GHTLLNYSLK YLPATAVSTV
TLVEPVGSTV LAYLLLHQSV GLIEALSMTV TLIGVYLSIR GGL