Gene Cmaq_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1971 
Symbol 
ID5708445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2047434 
End bp2048510 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content43% 
IMG OID641276481 
Productglutamate-1-semialdehyde 2,1-aminomutase 
Protein accessionYP_001541777 
Protein GI159042525 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAACTG TTATCTTCGT GGTTAAGGGC TTGGAGTTGT TTGAGGTTCC GAGGCAGGTT 
GTTTTTGGGC CTAACGCCAT AGGTAAGGTT TCAGAGGTGC TTACTTACCT TGGATTAAGG
AGGGGTTTAA TAATAACTGG TCACATTCAC AGTAGGCATA TTGCATCTAA GGTTAGTGAA
CAGTGCGTTG ATTGCCAGAT AATTAGTGAT GATGAAATTG AATTAAGCGA CGTAGTGAAG
GGTATGAGTG CGTTCTCTGA TGTTGACTTC ATCGCCGGTG TAGGTGGGGG TAGGGTTATT
GATGTTAGTA AGGTTATAGC CTATAAGCTT AATAAGCATT TAATATCAAT ACCAACTGTA
GCTAGTCATG ATGGTATAGC GTCACCGTAT ATTTCATTCC TAATGCAGGA TGATTTAAAC
AAGTTAGGTG TGGGTAAGGT TAGGAAAACC CCCTTAGCAA TAATAGTGGA TACTGGCATA
GTTGCTGAGG CACCTAGGGT ATTCCTACTA GCCGGTATTG GGGAATTACT GGGTAAGAAG
GTGGCTTTAA TGGATTGGAG ACTTGGCCAT AGGATTAAGG GTGAAGACTA CAGTGAATCA
GCAGCCATGT TAGCCTTATC AAGCCACATG ATAATAATGA ATAACGTGAA TAAATTAACT
AGGCATGGTG AAGAGGAGAC TAGGATAGTT GTTAAAGCCC TATTAGGCTG CGGGGTAGCC
ATGGCTATAG CTGGTAGTAC AAGGCCATGC AGTGGGTCTG AGCACCTCTT TAGTCATTCC
CTTGACTTAC TGGCTAGGGA ATATGGGGTG AAGCAGGCAA TGCATGGTAT GCAGGTTGCC
TTAAGCTCAG TGATTATGCT TTACCTACAT GGTGCTAATT GGAGGAGGAT AATTAAAATA
ATGAAGATGC TTGGCCTACC AACAAGCTTT AAGGAACTTG GATACGATAA GGAACTGGTG
GTTGAGGCGT TAATGAATGC TCATAGAATT AGGCCAGACA GGTACACTAT ACTTGGTTCA
AATGGCTTAA CCAGGGAGGC TGCTGAGGCT GCCTTGGAGC AAACAGGCGT AATCTAG
 
Protein sequence
MQTVIFVVKG LELFEVPRQV VFGPNAIGKV SEVLTYLGLR RGLIITGHIH SRHIASKVSE 
QCVDCQIISD DEIELSDVVK GMSAFSDVDF IAGVGGGRVI DVSKVIAYKL NKHLISIPTV
ASHDGIASPY ISFLMQDDLN KLGVGKVRKT PLAIIVDTGI VAEAPRVFLL AGIGELLGKK
VALMDWRLGH RIKGEDYSES AAMLALSSHM IIMNNVNKLT RHGEEETRIV VKALLGCGVA
MAIAGSTRPC SGSEHLFSHS LDLLAREYGV KQAMHGMQVA LSSVIMLYLH GANWRRIIKI
MKMLGLPTSF KELGYDKELV VEALMNAHRI RPDRYTILGS NGLTREAAEA ALEQTGVI