| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1964 |
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| Symbol | |
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| ID | 5708461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 2040074 |
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| End bp | 2041303 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641276473 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001541770 |
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| Protein GI | 159042518 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGTT GCGTGAGTAT GCATATGAAT GTGAAGGATT TACTCTCAGA GCGGACTAAC
TACATGAAGG CCAGTGACAT AAGGGAGCTC CTCAAATGGG CCACGGCTGA CGTAATATCC
TTCGGAGGGG GTTTACCGGA TTTATCCCAA TTACCACTTA ATGAGTACTC TGAGGTAGCT
AAATTCGTTG TAAGTAACTA TGGTTTAAAG GCGCTTCAAT ATGGTAAAAC AGAGGGGGTT
GATGAGCTTA AGGAGGAGTT GGCTAAGTTC ATGGCTAAGC AGGGCATTAG GACTGATGCA
TCATTAATAC TACCCACTGT GGGTAGCCAG GAGGCGCTTG AACTCATGGC AAGGGTCTTC
ATTGACCCAG GTGACGTAAT AATTACTGAG AAACCAACCT ACTTTGCTGC ATTACAGGCC
TTTAGGGTTT ATAGGGCTAG GATAATTGGT GTCGATATGG ATAATGATGG ATTAATCATT
GATAAGCTTG AGGACACGAT TAAGAGGCTT AGGAGTGAGG GCGCTAGAGT AAAGTTCATA
TACACCATAC CCATTTGCCA AAACCCCACT GGGGTAATGA TGAGTATTGA TAGGAGGAAG
GCGCTGCTTG AGTTAGCCAG TAGGTATGAT TTAATGATTC TTGAGGATAA TCCATACAGT
TACTTCACCT TTGACCCAGT GGATACAACA CCCCTAAAGG CCCTTGATAA TGAGGATAGG
GTCGTGTACA CGTCAACGTT CAGTAAGATA ATAGCCCCAG GCATTAGATT GGGTTGGGTT
GTGGCTAATC AGGATATAGT GAATTGGTTA GCCATAGCTA AGCAGGCAAT GAATCTACAT
ACCCCAACCC TAAGCCAATA CATAGCCTAC GAATTACTGA GAAGAGGTAT AGTGGATAGG
TATATTTCTA AGATTAAGGA AACCTATAAG GTTAAGAGGG ATGCAATGCT TGACGCATTA
TCCAGGTACA TGCCGAGTGG GGTTTCATGG ACTAAGCCAA GTGGGGGAAT GTTCATATGG
GTTACCGTCC CCGGCAACGT GAGGACTGAG GATATGCTTA ACTTAGCTAT AAGAAAGTAT
AAGGTTGCCT ACGTACCGGG TAAATCATTC TACCCAGATG AGGATGTTCA TAATGATATG
AGACTGAACT TCACCTACCC ATCAGTGGAC CAGATATATG ATGGTGTTAG GAGACTGGCA
CTGGCCATAG AGGAATATAA AGGCAAGTAA
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| Protein sequence | MFSCVSMHMN VKDLLSERTN YMKASDIREL LKWATADVIS FGGGLPDLSQ LPLNEYSEVA
KFVVSNYGLK ALQYGKTEGV DELKEELAKF MAKQGIRTDA SLILPTVGSQ EALELMARVF
IDPGDVIITE KPTYFAALQA FRVYRARIIG VDMDNDGLII DKLEDTIKRL RSEGARVKFI
YTIPICQNPT GVMMSIDRRK ALLELASRYD LMILEDNPYS YFTFDPVDTT PLKALDNEDR
VVYTSTFSKI IAPGIRLGWV VANQDIVNWL AIAKQAMNLH TPTLSQYIAY ELLRRGIVDR
YISKIKETYK VKRDAMLDAL SRYMPSGVSW TKPSGGMFIW VTVPGNVRTE DMLNLAIRKY
KVAYVPGKSF YPDEDVHNDM RLNFTYPSVD QIYDGVRRLA LAIEEYKGK
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