| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1949 |
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| Symbol | |
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| ID | 5709853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 2026816 |
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| End bp | 2027856 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641276457 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001541755 |
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| Protein GI | 159042503 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGA CTGTGCATGA TGAGGGTTAT TTAAGGCATG AGACGCCTTC GAATCATCCT
GAGTCCCCTA ATAGGGTATT GAGCGCGTTA AGTGGATTAA GTGGGTTAGC TAAGGTGATT
AAACCCATGG TTAATGTTGA TTTAATTGAA ACAGCTGGGC TTGTTCACGA GTACCATTAC
GTTGAGTACG TTACATCACT TTGCGCAACT GGGGGGTGGC TTGACCAAGA CACCTATGTA
TCCAAGGGTA CTTGCGACGC CTTAAACTCC AGTGTTAACG CCTTAGCCAC AGCGGTTAAT
CTACTTAAGT CAGGTGTAAG GTACGTTTAC CTACCCTTAA GGCCCCCTGG TCATCATGCT
GGATTCAGGG GTAGGGCACT CATGGCTTCA ACGCAGGGAT TCTGCATACT TAATAACGCC
GCAATAATCA GTAGTCTACT ACTTAAGGGT GGGGCCTCTA GGGTTGCTGT ACTGGATATT
GATGCGCATC ATGGTAATGG TACACAGGAA ATATTCTACA ACACATCCAG GGTCTTCTAC
ATTAGTACTC ACCAGGATCC AAGAACACTT TACCCGGGTA CTGGTTATGT TAATGAGACT
GGGGTGGGTG ATGGGGAGGG CTTTAACATG AATATACCAT TACCACCAAT GACTGGTGAT
GATTTATATA AGATTATCTT AAGGCCAATT GAGAATGCAT TAAGGGAATA TAAGCCAGAT
TACGTAGTGG TGTCACTGGG CTTTGACGCA CATTATCTCG ATCCATTAAC TAACCTTAAC
CTAAGCCTAA ACAGTTACAT TGAGGTATTC CTCATGATTA GAAGGCTCAT TAATGAGGGT
GTTACCGGGG GTTCAGTTTA TGTCCTAGAG GGTGGTTATA ATTCTGATGT TATTAAACAG
GGTTCAAGGG CCTTAGCCAT GGTAAGTAAT GGTGTGGATT CAATTAGAAT TGAGGATCCC
ACTAGGACTG ATGCAGGTGT GGTTAAGTAC TTTAATAAAA TGATTGAGCA GCATAAGGCA
TTATTCACCC AGTACTGGTA G
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| Protein sequence | MLVTVHDEGY LRHETPSNHP ESPNRVLSAL SGLSGLAKVI KPMVNVDLIE TAGLVHEYHY
VEYVTSLCAT GGWLDQDTYV SKGTCDALNS SVNALATAVN LLKSGVRYVY LPLRPPGHHA
GFRGRALMAS TQGFCILNNA AIISSLLLKG GASRVAVLDI DAHHGNGTQE IFYNTSRVFY
ISTHQDPRTL YPGTGYVNET GVGDGEGFNM NIPLPPMTGD DLYKIILRPI ENALREYKPD
YVVVSLGFDA HYLDPLTNLN LSLNSYIEVF LMIRRLINEG VTGGSVYVLE GGYNSDVIKQ
GSRALAMVSN GVDSIRIEDP TRTDAGVVKY FNKMIEQHKA LFTQYW
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