| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1887 |
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| Symbol | |
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| ID | 5710233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1963020 |
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| End bp | 1963712 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276395 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001541694 |
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| Protein GI | 159042442 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00394166 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.954448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGGTT TAACAAGGGA TGACGTGTTT AAGGCCTTAT CATTAGTTAC AGTTAATGAG
AGGGAATTCC TAGGTAGGTG GGTTTTCACT AATAATGCAT CAGTGTTTGA GGGTTTAGTG
GCTGTTATGC TTACGCAAAA CACCAGTGAT AAAGTGGCCA CTAGGGTTTA TGAGAGGCTC
AAGGAGAGGC TCGGTTCAAT AACACCCAAC ACTATATTAA GCTTAAGTAA AAGTGAGTTG
GAGAATATAT TGAGGCCCAT TGGCTCCTTT AGGCAAAGGG CCAGGAGGCT GATTGAATTA
GCCAATACTG TTAATGAGAA ATACAACGGC TCACTGGAGT TCATTAGGGG TATGGGTACT
GATGAGGCTA GGAGAACACT CATGAACCTG CCTGGTGTTG GACCTAAAAC AGCCGACGTG
GTTCTACTTA ATTTAGGTAA ACCCGTTTTC CCAGTGGATA CTCACATAAT GAGGATTAGT
CATAGGTTAG GTGTAATGGG TGGTTATGAG AAGGTTAGCG CCTTCTGGAT TAAGTTACTG
AAGCCTAATG AGTACTTAAT GGTTCACCTT GGTTTAATAG CCTTCGGTAG GGCAATATGT
AGGAGTAGAA GGCCATTATG TGAACATTGC CCCCTTAGGG TTAAGTGCAA GTATTACTTA
AGTATTAGCA AATCCAATCA ACCACATGGT TAA
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| Protein sequence | MEGLTRDDVF KALSLVTVNE REFLGRWVFT NNASVFEGLV AVMLTQNTSD KVATRVYERL
KERLGSITPN TILSLSKSEL ENILRPIGSF RQRARRLIEL ANTVNEKYNG SLEFIRGMGT
DEARRTLMNL PGVGPKTADV VLLNLGKPVF PVDTHIMRIS HRLGVMGGYE KVSAFWIKLL
KPNEYLMVHL GLIAFGRAIC RSRRPLCEHC PLRVKCKYYL SISKSNQPHG
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