| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1864 |
|---|
| Symbol | |
|---|
| ID | 5709664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1938929 |
|---|
| End bp | 1940383 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641276371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541671 |
|---|
| Protein GI | 159042419 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000183648 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.470127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCAC CTTTAAGAAA AATAGATAGG CTCATTTGGG AAATACCTAA GACGTATAAA
CCATGCATGA AGGTTCCAGC TAGGATATTT GCTGATGAGT CATTAATAGA GAAAATGAAG
ACTGATTCAA CACTTGAGCA GGCAGCTAAC GTGGCTTGCT TACCTGGGGT ATATAAGTAT
AGTATAGCAT TACCCGACGC GCACCAGGGC TACGGCTTCC CAGTGGGTGG TGTGGCTGCT
GTGGATTCGA ATCAAGGTAC AATAAGCCCA GGGGGAATAG GTTATGATAT TAATTGCGGT
GTTAGGGTGC TTAGGACTGA TTTAACTGAG AATGAGGTGA GGCCTAGGTT GAGGGAACTT
GTGAACACAA TCTTTGAACT GGCACCGGCT GGTGTTGGTG AGACCGGTAA ACTGCACTTA
CCTGTATCTG AGCTTAATAA GGTGCTTGAT GAGGGTGTGG ACTGGGCTAT TAGGAATGGT
TACGGTTGGA CTGATGATAA GGAGTACATT GAGCAGAACG GTAGTTGGGA CTTCGCGGAT
TCAAGTAAGG TTAGCCAGAG GGCTAAGGAG AGGGGGAAGG ACGAGATTGG AACCATTGGG
TCAGGTAACC ACTTCATTGA GATTCAGGTG GTTGATAAGA TATTTAACCC TGATGTGGCC
AAGGTCTTCG GCATAGAGAA GGAGGGGCAG GTACTAGTCA TGATTCACTC AGGTTCAAGG
GGATTAGGAC ACCAGGTGGC TACGGATTAC ATTAAGGTTG CTGAAAGCAA AATGAGACAA
TGGGGCCTCT ACCTACCTGA TAGGGAATTA GCAGCCTTAC CGTTAACGGC AAGGGAGGCG
CAGGACTACT TACACGCAAT GGCTGCCGCA GCCAACTACG CATGGACTAA TAGACATTTA
TTAATGCATT GGGTTAGGGA GTCCTTTAAG AGGGTTTTCG GAAGGGACCC TGATAAATTA
GGCATGAGGA TAATCTATGA TGTTGCTCAT AATATAGCTA AGTTTGAGGA GCATGTAGTG
GATGATGAGG GTCATAGGGC TAAGGTTTGG GTGCATAGGA AGGGGGCTAC TAGAGCCTTC
CCAGCGGGTA GGGAGGAGAT ACCTAAGGTG TATAGGGGGA TCGGGCAACC AGTCCTAATA
CCTGGAAGCA TGGGTACGGG CTCATATATT CTCGTCGGCT TTGAGAAATC AATGCAGTTA
ACCTTCGGTA CAGCCCCACA TGGGGCTGGT AGACAGATGA GCAGATCAGC GGCCGTTAGA
AGTCTACCAC CAAGTAAGGT TAAGGCGGCT TTGGAGTCAA GGGGAATTAT TATTAGGAGC
GCTGAATCAG AGATAATAAG TGAGGAGGCC CCCGAGGCCT ATAAGAATGT CGATGTTGTG
GCTGAGGTTT CTGATGCATT AGGCTTAGCT AAGAAGGTTG TTAGAATGAG GCCAATAGGG
GTTGTTAAGG GTTGA
|
|---|
| Protein sequence | MVPPLRKIDR LIWEIPKTYK PCMKVPARIF ADESLIEKMK TDSTLEQAAN VACLPGVYKY
SIALPDAHQG YGFPVGGVAA VDSNQGTISP GGIGYDINCG VRVLRTDLTE NEVRPRLREL
VNTIFELAPA GVGETGKLHL PVSELNKVLD EGVDWAIRNG YGWTDDKEYI EQNGSWDFAD
SSKVSQRAKE RGKDEIGTIG SGNHFIEIQV VDKIFNPDVA KVFGIEKEGQ VLVMIHSGSR
GLGHQVATDY IKVAESKMRQ WGLYLPDREL AALPLTAREA QDYLHAMAAA ANYAWTNRHL
LMHWVRESFK RVFGRDPDKL GMRIIYDVAH NIAKFEEHVV DDEGHRAKVW VHRKGATRAF
PAGREEIPKV YRGIGQPVLI PGSMGTGSYI LVGFEKSMQL TFGTAPHGAG RQMSRSAAVR
SLPPSKVKAA LESRGIIIRS AESEIISEEA PEAYKNVDVV AEVSDALGLA KKVVRMRPIG
VVKG
|
|---|
| |