Gene Cmaq_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1862 
Symbol 
ID5709662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1937710 
End bp1938033 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content45% 
IMG OID641276369 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 
Protein accessionYP_001541669 
Protein GI159042417 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0417401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.959397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC TCAAGTCCTG GACTCAAATA CCCATAGGGG GTTACATAAC TGAACCAAAG 
AACTCCATGA ACAATAAAAC TGGTTCATGG AGAACCCAGA GACCAGTAAT AGACCAGGAT
GCATGCACTA GATGCCGCAT ATGCTGGCTC TACTGCCCTG AACCAGCAAT ACTTGAGCTT
GATAAGCCCT ATGTGGCTAA GAATGGGAGG AAGTACAGCA TCACGTTTGA GGTTAATTAC
GATTACTGCA AGGGCTGTGG AATATGTGCA AACGAATGCC CAGTTAAGGC AATAAAGATG
GTGCCTGAGG TGGTTCAGCA ATGA
 
Protein sequence
MSELKSWTQI PIGGYITEPK NSMNNKTGSW RTQRPVIDQD ACTRCRICWL YCPEPAILEL 
DKPYVAKNGR KYSITFEVNY DYCKGCGICA NECPVKAIKM VPEVVQQ