Gene Cmaq_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1861 
Symbol 
ID5709661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1936490 
End bp1937713 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content48% 
IMG OID641276368 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001541668 
Protein GI159042416 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.145713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.936544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG TACTTGAGAG GCCGAGGGAG AGGGGTATTG TTGTTGAGAA GAAGGGTTTA 
ACGACAAACT ACGCTGTTGC TCAGGCAGTT AAGGATGTTG ACGTTGATGT TGTTGCAGCA
TACCCAATAA CACCTCAAAC AACTATAATT GAGAAATTAG CCGAATACGT GGCTAATGGG
GAACTTGACG CTGAATTCAT ACCCGTTGAG TCAGAGCACA GTGCCTTATC AGCAGCAGTG
GGTGCATCAG CAGCCGGCGC CAGGGTTTTC ACAGCAACGT CTGCTCAAGG TCTTGAGTTA
ATGCATGAGA TACTTCACAT AGCCTCAGGC CTAAGATTAC CCATAGTTAT GGCGGTGCCC
GGTAGGGCCT TATCAGCCCC AATAAGCATA CATGGTGATT ACCAGGACTT AATGAATATT
AGGGACACTG GGTGGATCAT CTACATAGCG TCCACTGCCC AGGAGGCTTA CGATACTGTT
ATTGAGGCCT TCAGGGTTGC TGAGGATCCC AGGGTTCAAT TACCGGTTAT AGTATCCTAC
GATGGGTTCC TAATGAGCCA TACCACAGAG CCTGTTGATG TATATGACCC TAAGGTTGTG
CGTGAGTTCA CGCCAAGGAG ACGCAACACT AGGCCTATTC TTAACCCTGA GAACCCAGTA
ACAATAGGGG CCTTAGCAAC CCCTGACTGG TATTATGAGA TAAAGTACCA GACTATTAAT
GCGCTTAAGT CATCTAGGGG TGTAATTGAT GAAGTGGATT CTGAATTCAA TGAGAAGTTC
GGTAGATCAT ATAAGCCTGT GGAGGGCTTT ATGATTGATG ACGCTGACTA CGTCCTAGTC
ACATACGGTG GTGCAGCAAC CTGGAACGCC CTTGAGGCTG CTAAGGAGGC TAGGGATAGG
GGGCTTAAGG CTGGTGTACT TAGGATTAGG CTCTTCAGGC CCTTCCCAGC AAACGACCTG
GTTAAGGTTC TCTCCAACGC TAAGGCAATA GCCGTTATTG ATAGGGCTGT GGCACCGGGT
TCACCCATAG AGGGACCGGT CTTTAAGGAC GTCTACATAT CTCTACACAT GGCTGGAGTC
GATAAGCCGA TGCTCTCAGT AATACATGGT CTCTCACAGC GTACAATGTA CATAAGGGAC
TTCTATGAAT TATACTATAG GCTTAAGGAT ATTGCTAAAA ACGGTAAGTC ACCGCAGGAG
TCATTATTCA TGGGGTTGAG GTGA
 
Protein sequence
MTQVLERPRE RGIVVEKKGL TTNYAVAQAV KDVDVDVVAA YPITPQTTII EKLAEYVANG 
ELDAEFIPVE SEHSALSAAV GASAAGARVF TATSAQGLEL MHEILHIASG LRLPIVMAVP
GRALSAPISI HGDYQDLMNI RDTGWIIYIA STAQEAYDTV IEAFRVAEDP RVQLPVIVSY
DGFLMSHTTE PVDVYDPKVV REFTPRRRNT RPILNPENPV TIGALATPDW YYEIKYQTIN
ALKSSRGVID EVDSEFNEKF GRSYKPVEGF MIDDADYVLV TYGGAATWNA LEAAKEARDR
GLKAGVLRIR LFRPFPANDL VKVLSNAKAI AVIDRAVAPG SPIEGPVFKD VYISLHMAGV
DKPMLSVIHG LSQRTMYIRD FYELYYRLKD IAKNGKSPQE SLFMGLR