| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1860 |
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| Symbol | |
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| ID | 5709617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1935525 |
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| End bp | 1936484 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641276367 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001541667 |
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| Protein GI | 159042415 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.520628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.888887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC AAGTTAAGGT TGGTATAAGA ACCATATGGG ATGTACCTAA GGAGGAGTAT
TTTGGGCCGG GCCAATTAAC ATGCGCCGGC TGCGGCCCAT CGCTGGCAGT TAGGCTTATG
CTTAAGGCAG CTGGACCAAA CACAATAATA GCCAACGCCA CTGGTTGCAT TGAAGTAACC
TCGACTCAAT ACCCATACAC AGCCTGGGCT GTACCGTATA TTCACGTGGC CTTTGAGAAT
GCTGCCGCTG TTGCATCAGG GATTGAGGCG GCTATTAAGG CGCTTAATAG GAAGGGTATA
GCTAACACTA AGGCTAAGGT AATTGCCCTA GCTGGTGATG GTGGGACCTA CGATATTGGT
ATTCAAGCAT TAAGTGGAAT GTTGGAGAGG GGGCATGGTG TATTATACGT GCTTTACGAT
AATGAGGCAT ACATGAACAC CGGTATACAG CGTTCAGGCG GTACACCACG CTTCGCGTGG
ACTACTACGT CACCGGTGGG CAGTAAGATT AGGGGTAAGG TTCAGAGTAA GAAGGACATA
ATGAGTATTG TAATAGCTCA CCGTGTACCC TATGCCGCCA CAGCAAGTAT AGCGTATCCA
ATTGACTTCA TGAGTAAGGT TAAGAAGGCT CTTGACGCAT TAGATGAAGG GCCAGCGTTC
CTGCACGTAT TTGCCCCATG CCCACCAGGT TGGAGGATTG ATGAGAGTAA GACTGTTGAG
ATAGCTAGGC TAGCCGTGGA TACTGGGGTG TTCCCACTTT ACGAGTGGGA TCACGGTAAG
TTTAGGCTTA ATCCACCCAG TAATGCGCAT ATTGATAAGT CGAAGAGGAA GCCTCTCATA
AATTACATTA AGCCGCAGGG TAGGTTCGCC CATTTGAAGG AGGATGAGAT TAAGGCCATG
GAGGCTGAAA TAGATAGTTA CTGGGATTAC TTAACAAGGC TGCTTAAGGC CTTTGGTTAA
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| Protein sequence | MAKQVKVGIR TIWDVPKEEY FGPGQLTCAG CGPSLAVRLM LKAAGPNTII ANATGCIEVT
STQYPYTAWA VPYIHVAFEN AAAVASGIEA AIKALNRKGI ANTKAKVIAL AGDGGTYDIG
IQALSGMLER GHGVLYVLYD NEAYMNTGIQ RSGGTPRFAW TTTSPVGSKI RGKVQSKKDI
MSIVIAHRVP YAATASIAYP IDFMSKVKKA LDALDEGPAF LHVFAPCPPG WRIDESKTVE
IARLAVDTGV FPLYEWDHGK FRLNPPSNAH IDKSKRKPLI NYIKPQGRFA HLKEDEIKAM
EAEIDSYWDY LTRLLKAFG
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