Gene Cmaq_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1840 
Symbol 
ID5709919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1917583 
End bp1919007 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content44% 
IMG OID641276346 
ProductFeS assembly protein SufB 
Protein accessionYP_001541647 
Protein GI159042395 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGG ACTTACATAA CCTGGTGGAG GAGGGATTAA CCCCAGAGGA GGTTCTTAGT 
AGGGATACGC CGATTAGAAG AAGCATTGAG ATTAAGGGTA AGATAACCAG TGATGTTATT
GAGGAGATAT CTAAGGCTAA GAATGAGCCT GATTGGATGA GGAGGCTTAG GTTAAGGAAC
CTTGAGTTAT TCAATAAATT ACCAGCACCA AACTGGTTAC CCAACTGGGT CCTGGAGAAC
ATTAACCTTG AGGAGTACTC AACATACGCT AAACCCGACA TTAATAGGGC CAGTAGTTGG
GATGAAATAC CACCCGAGGT TAGGAAGTAC TACGAGTCAT TGAATATACC AGAGATAGAG
GCTAGGGCAT TAATGGGCCT TGGTGCACAA TTGGATTCAG AAATGATATA CTTCAACATT
AGGAAGCAGT TAGCTGAAAA AGGCGTGGTA GTGATGCCCA TGGAGGAGGC TGTTCAGAAG
TACCCTGACC TAGTTAAGCA GTACTTCATG AAGATATTCC CACCTGAACA TAAGTTCGCT
GCACTACATG GAGCACTCTG GAGTGGTGGA GTATTCGTCT ACGTACCCCC AGGGGTTAGG
ATTGAAGCAC CCATTGAGGC CTTCTTCCTA ATAAGCAATG CCGGTGAGGG TCAATTCGAA
CACACATTGC TTATAGCCGA TAAGGACAGT TACATACACT TCATTGAGGG TTGCTCAGCC
CCAAGGTTCA GTAGGTATAG TTTCCATGAT GGTATGGTTG AGTTATACGC CCATGAGGGG
GCTAGGATAA GGTTCACCAC AGTGCAGAAT TGGAGTAGGA ATGTGATAAA CTTCAATAAT
AAGAGGGCTA TAGCTGAGAG AAACGCCAAG GTTGAGTGGG TTGAAGCCAG TATAGGAAGC
ATGGCCAGTT TCGTCTACCC ATCCACAATA CTTAAGGGTG AGGGGGCTGG AACGGAAATA
ACAGGCATTA CCGTGGCTAA TGGTAAGCAC ATTAAGGAGA ATGGCGCTAA GGTGATTCAT
GATGCGCCTA ATACGTATTC TAAGATAGTT AATAAGTCAA TATCGGCTAA TGGTGGGACT
GTGGTGTATA AGGGGGTTGT TTACGTTAGG AGGGGTGCTA GGTTTGCTAG GTCTCATGTT
TCATGTGATT CGCTTATTCT TGATGATAAG TCTAAGGCAT ACACTATTCC TCATGATCAA
GTATTCGAGG ACACGGCAGT GGTTACCCAC GAAGCCTACA CAGGCAGAAT AAGCGAAGAT
AAACTATTCT ACCTAAGAAG CAGAGGATTA AACGAAGAAG AAGCAAAAAG CCTAATAGTA
CTTGGATTCA TAAGCGATGT AACAGAGGGT TTACCATTCG AGTACGCCAT GGTTTTAAAC
AGGGTAATTA GCCTTGAATT CAGTAAATAC GGTAAGGTGG CTTAA
 
Protein sequence
MRQDLHNLVE EGLTPEEVLS RDTPIRRSIE IKGKITSDVI EEISKAKNEP DWMRRLRLRN 
LELFNKLPAP NWLPNWVLEN INLEEYSTYA KPDINRASSW DEIPPEVRKY YESLNIPEIE
ARALMGLGAQ LDSEMIYFNI RKQLAEKGVV VMPMEEAVQK YPDLVKQYFM KIFPPEHKFA
ALHGALWSGG VFVYVPPGVR IEAPIEAFFL ISNAGEGQFE HTLLIADKDS YIHFIEGCSA
PRFSRYSFHD GMVELYAHEG ARIRFTTVQN WSRNVINFNN KRAIAERNAK VEWVEASIGS
MASFVYPSTI LKGEGAGTEI TGITVANGKH IKENGAKVIH DAPNTYSKIV NKSISANGGT
VVYKGVVYVR RGARFARSHV SCDSLILDDK SKAYTIPHDQ VFEDTAVVTH EAYTGRISED
KLFYLRSRGL NEEEAKSLIV LGFISDVTEG LPFEYAMVLN RVISLEFSKY GKVA