Gene Cmaq_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1824 
Symbol 
ID5708725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1901939 
End bp1903042 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content39% 
IMG OID641276329 
Producthypothetical protein 
Protein accessionYP_001541631 
Protein GI159042379 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCATT TTGTTCTAAA TAAGCAAGAC GTTGAGGATT TAGTTGTTGG CGCCGCTATA 
CTTGGTACCG GCGGTGGTGG CGATCCATAT ATTGGTAAAT TAATGGTTCT TCAGGAATTA
GAACGCGGTA GAAAAATCGA AGTTGTTAGT ATCGACGAGA TTGATGATGA GGCCTTCATA
ATACCCGTAG CCGCTATGGG AACGCCTGTA GTTCTAATGG AGAAGATACC CAGCGGCAAG
GAGGCATTGT TCTCACTTAA TTTATTAGAG AAGTACTTTA ATAGAAAGGT GGACTTTATA
TCACCAATTG AGGCTGGTGG TGTTAATTCC ACGATACCTC TTGTGGTGGC AGCAGAAAGG
GGATTGCTTG TTATTGATGC TGATGGTATG GGTAGGGCAT TTCCCGAACT TCAAATGGTC
ACTTTTCACA TATACGGAAT AAAAGCAACA CCAATGGCTC TTTCTGATGA ACGTGGTAAT
GCAATTATAC TTGATGCTAT TGATAACTTC TGGGCTGAAA GGATAGCTAG AACTGTAACC
GTTAGATTTG GTGGCTCTGC TTGGATAGCT ATCTATCCAA CTTATGGGAA ACCATATAAA
GATGCTGCTG TGAAGGGCAG TATATCATTT GCGATTGAAA TAGGTAGAAC ACTAAGGGAT
GCAAAGATCA CTGGCAAGAA TCCAATTGAT GCATTGCTAG ATGTAACTAA GGGTTATGCC
CTATTTAAAG GTAAGATCAT TGATGTGCAA AGGTTTAATA TAGGTGGTTT TGCAAGAGGT
GAGGCTGTGA TTGAAGGGCT CGATGAATAT AAAGATTCAA AGATTACTAT TAAATTTCAA
AATGAAAATC TCGTAGCAAT TAAGGATGGA GAGATTATAG CATCGGTACC CGATTTAATA
ACAGTACTTG ATAGTGAAAC CAGTAAACCC ATAACCACAG AGAGACTTAG ATATGGTTTA
AGGGTTATCG TAATTGGTAT ACCGTGCAAT GAAAAATGGA GAAATCCAAG AGGTCTAGAA
GTTGTAGGGC CTAAGTACTT TGGTTATGAC ATTGATTATG TACCCATTGA AATGAGAGTT
AAGAAAATAG GTGGTGTGGC ATGA
 
Protein sequence
MVHFVLNKQD VEDLVVGAAI LGTGGGGDPY IGKLMVLQEL ERGRKIEVVS IDEIDDEAFI 
IPVAAMGTPV VLMEKIPSGK EALFSLNLLE KYFNRKVDFI SPIEAGGVNS TIPLVVAAER
GLLVIDADGM GRAFPELQMV TFHIYGIKAT PMALSDERGN AIILDAIDNF WAERIARTVT
VRFGGSAWIA IYPTYGKPYK DAAVKGSISF AIEIGRTLRD AKITGKNPID ALLDVTKGYA
LFKGKIIDVQ RFNIGGFARG EAVIEGLDEY KDSKITIKFQ NENLVAIKDG EIIASVPDLI
TVLDSETSKP ITTERLRYGL RVIVIGIPCN EKWRNPRGLE VVGPKYFGYD IDYVPIEMRV
KKIGGVA