| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1804 |
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| Symbol | |
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| ID | 5709954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1880750 |
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| End bp | 1882162 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276313 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001541615 |
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| Protein GI | 159042363 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000239079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGG GCAACTACAG CAGGGAGGAG ATCGAGAGAG GTATTGCTAG GATCTATGAG
ATTGTGTTAA ATACTAAGAA TATAACAGCT AGATACATAG TAATTCTTGC CTTGGCCTCG
CTATGGGTTG ATGCCTATGA TTTTGCAGCA TTCACATTTG CAACAGCAGC ATTTAAGAAT
ACGTTTCCCT GGATGTCCAC GTGGCTCTTT GGCCTAGCAG TAGCTGCGGT TCAAATAGGA
GCTACGGTAG GTGCTGTAGT TGGTGGTTGG TTAACTGATA GAATTGGTAG AAGAAACATG
TTCATCTTGA ATATGATACT CTTTACGGTA ATGGCAGTTG GGGCCGGTCT TGCACCGGAT
CCATATACTT TCACAGTCTT TAGAATATTA CTTGGTTTTG CATTGGGTGC AGATACGGCA
ACAGGTTTTG CGTACATATT CGAATACCTA GAGAAACAGC AAAGATTAGT CTGGTCTAAC
TTATGGCAGT TGCAGTGGTA TCTAATGTAT GAGGTTGTTA TATTTATCTT CGTATTACCA
TTCTACTTAA TAACTTACTC ATTACTTCAT CCATGGTTCT GGAGGATTAT TATGTTTGGA
GGGGCCGTTT TTGCGTTCAT TATATTAATG CTACGAGCAA GAATACCAGA GTCCGTACTA
TGGGAGGCAT ATAGGGGGCG TCTAGCCACT GCTAAGAGGA TCCTTAAGCG TACACACGGT
ATTGATTTAC CTGACGTACC TGATATTGAC GTAGAATTAA GAAGACCTGC TAGGGGATTA
AGGTCCGCAT TTAAGATATT CAGGAGGAAC AAGTGGAGGG AACTTGTTTA TTGCTTTAAT
GGAAACTTTG AACAGGGTTT TGAATTTTAC ACCTTTGGTT TCTACATGCC GTATATATTA
CTGACTATGC ACCTAGCCGG TTCATTAGCC ACTATAGAGG CATCTGCAAT ATTCTATGGT
ATGGGTGTAA TTGCTGGAGT CCTTACGGCA TATCTTACGC CTAGAATAGG TACTAAGTCT
CAGTACGTGA TCGGTGCTGC GTTAGCTGGC ATAACACTAC TTGGTCTTGC ATTCACATTC
CTGTATCACT GGCCCCTCTG GCTATTCGTA TTATTTGCTT CTGCATTTTA CTTTGGGCAT
GTTATTGTGC CTGCAAGCCA GGGTATGACG TCCATAAATG CGGCCTTCGG TGCCAGTGAA
AGAGGCACTG CAGCAGGCTG GGGTTATTTC TGGGTTAAGT TAGCCGCTGT TGTAGGTTCT
TTCATAGCGC CCACATGGTT AGCCGTTCTC GGTGCCCCTA AGATGACGGA AATACTGGGT
ATCTATGCTT TAGCAACTGC AATCTTGGGA TTAGCAATAG GTTTTGATGC TAGGAAGTAT
AAACCACCTG AAACAGAGGA GGTTGCTGTT TAG
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| Protein sequence | MSQGNYSREE IERGIARIYE IVLNTKNITA RYIVILALAS LWVDAYDFAA FTFATAAFKN
TFPWMSTWLF GLAVAAVQIG ATVGAVVGGW LTDRIGRRNM FILNMILFTV MAVGAGLAPD
PYTFTVFRIL LGFALGADTA TGFAYIFEYL EKQQRLVWSN LWQLQWYLMY EVVIFIFVLP
FYLITYSLLH PWFWRIIMFG GAVFAFIILM LRARIPESVL WEAYRGRLAT AKRILKRTHG
IDLPDVPDID VELRRPARGL RSAFKIFRRN KWRELVYCFN GNFEQGFEFY TFGFYMPYIL
LTMHLAGSLA TIEASAIFYG MGVIAGVLTA YLTPRIGTKS QYVIGAALAG ITLLGLAFTF
LYHWPLWLFV LFASAFYFGH VIVPASQGMT SINAAFGASE RGTAAGWGYF WVKLAAVVGS
FIAPTWLAVL GAPKMTEILG IYALATAILG LAIGFDARKY KPPETEEVAV
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