Gene Cmaq_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1792 
Symbol 
ID5708875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1866432 
End bp1867358 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content47% 
IMG OID641276303 
Productquinolinate synthetase 
Protein accessionYP_001541605 
Protein GI159042353 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.484061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGG AGGCATTGAT TAAGGAGATT AAGGGATTAA AGCAGGAGAG GAATGCCATA 
ATACTGGGTC ATAATTACAT GGACATGGAT GTACAATTAA TAGCGGACTT CACAGGTGAT
TCCTACGACC TGGCGGTTAA GGCCATGGAG ACTAAGGCTG AGGTCATAGT CTTCGCAGGG
GTTAGGTTCA TGGCTGAGCA GGCTAAGGCT TTGAACTACG ATAGGGAAGT ACTATCACCA
GACTTGAATG CGGGGTGCAC AATAGCGGAT GCACTGGATA CGGAGACCTT GAGGGAGTAT
AGGGAGAGGT ATCCTGGGGT TCCTGTTGTT CTCTACATTA ACTCAAACAT AGATGTTAAG
GCCATGGCTG ATTACATAGT CACCTCCTCA ACGGCAGTTA AAGCAGTTAG GAAGATACCG
GGTGATACTG TAATATTTGG GCCAGACTAC AACCTGGCTA CCTACGTTGA GAGGATGACT
AGTAAGAAAA TAATCAAGGT GCCACCGAAC GGTAAGTGCA TTGTGCATGG GAACTACGTG
CCTGATTACA TTAGGGAGGC GAGGACTAAG TACCCTGGGG CTAAGGTAAT GATTCACCCA
GAGGCGCCCT TGAACATTAT TGACCTAGTG GACTTCGTGG GCTCCACAAA CCAGATGATA
GAATTTGCAA GGAATAGCGA GGCCAGGGAG TTCATAGTAG GTACTGAAAT TGGGATGATA
AATGCGCTTA AACTAAAGGT CCCGGGTAAG GAATTCTACC CATTAACCAC CGAGCCCATA
GCCCGTTGCC CCTTCATGGC TATGATTACA CTAGAGAAGA TCTATAGGTC CCTGAGGGAT
GATGTTTACA GAGTTGAAAT ACCTGGGAAC ATAGCCGAGG CTGTTAGAGA GGCTTTCGAG
AGGACTAGGA AGCTACTTGG TGATTAG
 
Protein sequence
MSKEALIKEI KGLKQERNAI ILGHNYMDMD VQLIADFTGD SYDLAVKAME TKAEVIVFAG 
VRFMAEQAKA LNYDREVLSP DLNAGCTIAD ALDTETLREY RERYPGVPVV LYINSNIDVK
AMADYIVTSS TAVKAVRKIP GDTVIFGPDY NLATYVERMT SKKIIKVPPN GKCIVHGNYV
PDYIREARTK YPGAKVMIHP EAPLNIIDLV DFVGSTNQMI EFARNSEARE FIVGTEIGMI
NALKLKVPGK EFYPLTTEPI ARCPFMAMIT LEKIYRSLRD DVYRVEIPGN IAEAVREAFE
RTRKLLGD