Gene Cmaq_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1712 
Symbol 
ID5708500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1788989 
End bp1790212 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content47% 
IMG OID641276222 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001541525 
Protein GI159042273 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAATC GGCAGGACAT GATTAGTAGA GGGGTTAGGA AGATAATGGT TGGTGATCAC 
GCGGTTGCTG AGGCAGTTAA GATGGCTAGG GTTAACGTGG TTTCAGCATA CCCAATAACA
CCCCAGACTC TAATAGTTGA GAGGCTAAGT GAGATTATTG ATAAGGGGGA GTTGAAGGCC
GACTTCATAA GAGTTGAAAG CGAGTTCGCA GCCCTAGCCT CGGTTTATGG TGCATCGGCT
GCGGGGGCGA GGGCTTTTAC CGCTACTTCA AGCCATGGAT TATTCTACAT GTATGAGATG
CTTTGGTGGG CTGCAGCATC AAGACTACCT CTAGTCATGG CTGTGGTGAC TAGGGCGCTT
GGACCACCGT GGAATATTCA TGATGAGCAC ACTGACCTAT TGGCGATAAG GGATAGTGGA
TGGGTTATAG GTATGGCATC CAGTGTACAG GAGGCCTTCG ACATGACTCT CACCGCCTTT
AGGGTAAGTG AAGATGAGAG AGTCCTATTA CCAGTGGCTG TGGGTCTTGA TGGATTCGTG
TTAAGCCACA CAACGGAGCC AATCTACGTT CCTTATCAGG AGGATGTGGA TGCTTGGTTA
CCGCCAAGGA ACCCTAAGGT ACCTTATGTT ATTGAACCCG GTGGGGAACC GGTAACCTTA
GGTAACTTGC CTAAGTCTGA CCTGTACCAT GAGCTTCATA AGGTTTACAT GGATGAATCA
ATGAATGAGG CTAAGAAGGT GATTGCAGAG GCGTATAATG AGTACGGTAA ATTAACTGGG
AGGAATTATG AACCATTAAT TGAGTGCCAC AGGTGCAGTG ATGCTAAGTA CCTTGCAGTA
ACCATGGGTG CATGGAGTGG GGATGCGGAG ATCGCCATTG ATGAGTTAAG GAGAGAGGGC
TACCAGGTAG GGTTAATTAG GATCAGGTAC ATTAGACCAT TCCCTGATGA TGAGGTTTCA
GAACGCATTA ATGGGGTTAA GGGGGTTATT GTGTTTGATA GGGATTACTC AATGGGCTTC
GGTGGAATAT TGGCTGGTGA ATTAATGGGT CTAGTGCCGG GTAATGTATC GTTTAAGGGT
GTTGTAGCAG GCTTAGCTGG TGTTGATATG TCGCCAAGTG AATTCAAATC CATTATAAGG
GATTTCATAA ATGAAACCGA GAGGAACGGC GTCATGAGGG TGAGGAAGTG GTGGTATATA
CCTAATACCA ATGGGGGTGA TTAA
 
Protein sequence
MINRQDMISR GVRKIMVGDH AVAEAVKMAR VNVVSAYPIT PQTLIVERLS EIIDKGELKA 
DFIRVESEFA ALASVYGASA AGARAFTATS SHGLFYMYEM LWWAAASRLP LVMAVVTRAL
GPPWNIHDEH TDLLAIRDSG WVIGMASSVQ EAFDMTLTAF RVSEDERVLL PVAVGLDGFV
LSHTTEPIYV PYQEDVDAWL PPRNPKVPYV IEPGGEPVTL GNLPKSDLYH ELHKVYMDES
MNEAKKVIAE AYNEYGKLTG RNYEPLIECH RCSDAKYLAV TMGAWSGDAE IAIDELRREG
YQVGLIRIRY IRPFPDDEVS ERINGVKGVI VFDRDYSMGF GGILAGELMG LVPGNVSFKG
VVAGLAGVDM SPSEFKSIIR DFINETERNG VMRVRKWWYI PNTNGGD