Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1696 |
Symbol | |
ID | 5709114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1774575 |
End bp | 1775954 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641276204 |
Product | geranylgeranyl reductase |
Protein accession | YP_001541509 |
Protein GI | 159042257 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAAGA CATATGACGT GCTTATTGTT GGCGCTGGCA CAGCGGGTTC ATATGCGGCA TATTTAATGG CTAAGCAGGG TTTAAGTGTA GCATTAGTGG AGCGTAAGAG GGCTGAGGAG GTTTTCAAAG TAACTGGTGA TGCCATTGGG AAACACCACA TTGAAGAGTT AACTAAGTCA GGCTTAAGTA TTAGTAATGA CGTATTCATG ATTAAGTACG AGGGTGCTGA ATTATATAGC CCGGATTTAA GCATAAAGTA CTTTGTTGCA GGTGAGGGTT ACGGCCTCGA TATTGGTAAG TGGGCTCAAT GGCTGATTAA TGCAGCTAAT AATAGTGGCG CAGACATAAT AGATAATCAT ACTGTATCAA CACCAATAAT TGAGGGGGGC TTCGTGAAGG GTGTTAAGGC AAGTAGGAGG GATGGAACCC AGGTTGAGTT AAGGGCTAAG GTAACAGTGG ATGCCTCAGG TGCAACAGGG GTTGTGAGGA CTAAGTTACC TTCACAGTAT AGGATTAGTG AACCATTACT ACCAGAGGAT GCCTCCTACG CGTACAGGGA GATCGTTGAA GTTGATTACA GTATACCTAA TCCCCAGAAC ATAAGGATAT ACCTTGATAA TAATATATCA CCAGGTGGTT ACTGGTGGTT CTTCCCCAAG TCAGATAGGG TTGCTAACGT AGGTTTAGGC ATCTGGGGTA GGTTGGTTAA GGAGAATGGC TTAAACCCAA GGATCAACTA TGAGAAGTAC CTAGCCTCCT CACCATACGT TAAGGGTAGG AAACTGCTTC ACACTGGTGG TGGGATAGTG CCCACAAGGA GACCATTAGC CAGCATGGTT GGCCCAGGGA TTGTTGCTGT TGGTGATGCT GCTGTGGCCG TTAACCCAAT CCATGGCGGC GGTATTGGGC CTGCATTATT GTCATCAGCA TTAGCATCAA AAGCAATAAT TGAGGCATTG GAGAAGGGTG ATGTTTCTGA AGCCGGCCTA TGGAGGTATA ATTTAGATTA CTTAAATGCC TACGGCATTA AGCAGGCTCA ACTAGATGTA TTTAGGTTAA TGCTGCAGAC GCTTACCAAT GATCAATTGA ATAGGGGATT AAGGGCTAGG ATACTTACTG AGGATGAGGT TCTTAGAATG TCAATAAGCG GTAACCTCGA CTTAAGTGGC GGTAAGAAGG CATTGATGGC GCTTAGGCTA CTTAAGGTAC CTGATGTGGC TAGGAAGCTA TCATTAGCAT TAAGGTACAT GAATGAGATA AAGAAAATAT ACATTAATTA CCCAAGGGAT CCCAGTGAAT TAAATAATTG GCTGGCTGCA CTGGTGGCTA AGTATAACGA GTATAGGCTT AAACTTAAAT TACCCTTAAT GACCCTTTAG
|
Protein sequence | MYKTYDVLIV GAGTAGSYAA YLMAKQGLSV ALVERKRAEE VFKVTGDAIG KHHIEELTKS GLSISNDVFM IKYEGAELYS PDLSIKYFVA GEGYGLDIGK WAQWLINAAN NSGADIIDNH TVSTPIIEGG FVKGVKASRR DGTQVELRAK VTVDASGATG VVRTKLPSQY RISEPLLPED ASYAYREIVE VDYSIPNPQN IRIYLDNNIS PGGYWWFFPK SDRVANVGLG IWGRLVKENG LNPRINYEKY LASSPYVKGR KLLHTGGGIV PTRRPLASMV GPGIVAVGDA AVAVNPIHGG GIGPALLSSA LASKAIIEAL EKGDVSEAGL WRYNLDYLNA YGIKQAQLDV FRLMLQTLTN DQLNRGLRAR ILTEDEVLRM SISGNLDLSG GKKALMALRL LKVPDVARKL SLALRYMNEI KKIYINYPRD PSELNNWLAA LVAKYNEYRL KLKLPLMTL
|
| |