Gene Cmaq_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1696 
Symbol 
ID5709114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1774575 
End bp1775954 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content44% 
IMG OID641276204 
Productgeranylgeranyl reductase 
Protein accessionYP_001541509 
Protein GI159042257 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGA CATATGACGT GCTTATTGTT GGCGCTGGCA CAGCGGGTTC ATATGCGGCA 
TATTTAATGG CTAAGCAGGG TTTAAGTGTA GCATTAGTGG AGCGTAAGAG GGCTGAGGAG
GTTTTCAAAG TAACTGGTGA TGCCATTGGG AAACACCACA TTGAAGAGTT AACTAAGTCA
GGCTTAAGTA TTAGTAATGA CGTATTCATG ATTAAGTACG AGGGTGCTGA ATTATATAGC
CCGGATTTAA GCATAAAGTA CTTTGTTGCA GGTGAGGGTT ACGGCCTCGA TATTGGTAAG
TGGGCTCAAT GGCTGATTAA TGCAGCTAAT AATAGTGGCG CAGACATAAT AGATAATCAT
ACTGTATCAA CACCAATAAT TGAGGGGGGC TTCGTGAAGG GTGTTAAGGC AAGTAGGAGG
GATGGAACCC AGGTTGAGTT AAGGGCTAAG GTAACAGTGG ATGCCTCAGG TGCAACAGGG
GTTGTGAGGA CTAAGTTACC TTCACAGTAT AGGATTAGTG AACCATTACT ACCAGAGGAT
GCCTCCTACG CGTACAGGGA GATCGTTGAA GTTGATTACA GTATACCTAA TCCCCAGAAC
ATAAGGATAT ACCTTGATAA TAATATATCA CCAGGTGGTT ACTGGTGGTT CTTCCCCAAG
TCAGATAGGG TTGCTAACGT AGGTTTAGGC ATCTGGGGTA GGTTGGTTAA GGAGAATGGC
TTAAACCCAA GGATCAACTA TGAGAAGTAC CTAGCCTCCT CACCATACGT TAAGGGTAGG
AAACTGCTTC ACACTGGTGG TGGGATAGTG CCCACAAGGA GACCATTAGC CAGCATGGTT
GGCCCAGGGA TTGTTGCTGT TGGTGATGCT GCTGTGGCCG TTAACCCAAT CCATGGCGGC
GGTATTGGGC CTGCATTATT GTCATCAGCA TTAGCATCAA AAGCAATAAT TGAGGCATTG
GAGAAGGGTG ATGTTTCTGA AGCCGGCCTA TGGAGGTATA ATTTAGATTA CTTAAATGCC
TACGGCATTA AGCAGGCTCA ACTAGATGTA TTTAGGTTAA TGCTGCAGAC GCTTACCAAT
GATCAATTGA ATAGGGGATT AAGGGCTAGG ATACTTACTG AGGATGAGGT TCTTAGAATG
TCAATAAGCG GTAACCTCGA CTTAAGTGGC GGTAAGAAGG CATTGATGGC GCTTAGGCTA
CTTAAGGTAC CTGATGTGGC TAGGAAGCTA TCATTAGCAT TAAGGTACAT GAATGAGATA
AAGAAAATAT ACATTAATTA CCCAAGGGAT CCCAGTGAAT TAAATAATTG GCTGGCTGCA
CTGGTGGCTA AGTATAACGA GTATAGGCTT AAACTTAAAT TACCCTTAAT GACCCTTTAG
 
Protein sequence
MYKTYDVLIV GAGTAGSYAA YLMAKQGLSV ALVERKRAEE VFKVTGDAIG KHHIEELTKS 
GLSISNDVFM IKYEGAELYS PDLSIKYFVA GEGYGLDIGK WAQWLINAAN NSGADIIDNH
TVSTPIIEGG FVKGVKASRR DGTQVELRAK VTVDASGATG VVRTKLPSQY RISEPLLPED
ASYAYREIVE VDYSIPNPQN IRIYLDNNIS PGGYWWFFPK SDRVANVGLG IWGRLVKENG
LNPRINYEKY LASSPYVKGR KLLHTGGGIV PTRRPLASMV GPGIVAVGDA AVAVNPIHGG
GIGPALLSSA LASKAIIEAL EKGDVSEAGL WRYNLDYLNA YGIKQAQLDV FRLMLQTLTN
DQLNRGLRAR ILTEDEVLRM SISGNLDLSG GKKALMALRL LKVPDVARKL SLALRYMNEI
KKIYINYPRD PSELNNWLAA LVAKYNEYRL KLKLPLMTL