Gene Cmaq_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1681 
SymbolpyrB 
ID5710364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1757228 
End bp1758148 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content45% 
IMG OID641276189 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001541494 
Protein GI159042242 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.947755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTGGT TAAACAGGGA CGTCATCTCA TCCCTGGATT TCACTAGGGA TGATTTAATG 
CAATTATTCT ATGAGGCTAA GGAAATGGAG AATTACGCTA AATCCAAGTT AAACATACTT
GATGGTAAGA TAATGGCCAC GGCATTCTTT GAACCAAGCA CTAGAACTAG GTTAAGCTTC
GAGACCGCTA TGCTAAGGCT TGGTGGACGA GTACTGGGCT TTGGTTCAGT GGAGGCATCC
TCAGTGGCTA AGGGTGAGAG CCTTGGCGAC ACCATTAGAA TGCTTGACTC CTACTCAGAT
ATAATAGTCA TACGCCATAG CCTTGAGGGT GCAGCCAAGT ACGCCGCCGA TATAGCCACT
GTACCAGTGA TTAATGCTGG TGATGGAACC CAAAATCACC CAACCCAGGC AATGCTTGAT
GCATACACTA TTTGGAGGGA GTATGGGCGA TTAGATGATT TAACAATAGG CATACTGGGT
GACTTAAGGT ACGCTAGGGT TGTTACATCA CTGGTTCAAC TGCTAAGTAA CTTTAAAGTT
AAGCTACGCC TCATATCCCC TGAAATACTG AGGCCGAGGA GGGAGCTTGT GGACTTCATG
AGAATGAGGG GGATGAATTA TAGCCTGCAT TCAAACCTAA ATGAGGTTTT AAGTGAATTA
GACGTACTCT ACGTGGTTAG GATACAGAGG GAGAGGTTCC CTGACCCAGT GGAGTATGAG
AGGGTTAAGG GAAGCTTCAA GGTTACCCCA GAGTCATTGA TTGGCGCTAA GGATACGTTA
ATAATTCTTC ACCCATTACC TAGGGTTGAT GAGGTTGATC ATAGGTTAGA CTCAACAAGG
TACGCTAGGT ACTTTAGGCA GTCAGCCCTA GGTGTGCCCC TTAGGATGGC TCTCCTTAAA
TTAGTGCTTA AGGGTGATTA A
 
Protein sequence
MTWLNRDVIS SLDFTRDDLM QLFYEAKEME NYAKSKLNIL DGKIMATAFF EPSTRTRLSF 
ETAMLRLGGR VLGFGSVEAS SVAKGESLGD TIRMLDSYSD IIVIRHSLEG AAKYAADIAT
VPVINAGDGT QNHPTQAMLD AYTIWREYGR LDDLTIGILG DLRYARVVTS LVQLLSNFKV
KLRLISPEIL RPRRELVDFM RMRGMNYSLH SNLNEVLSEL DVLYVVRIQR ERFPDPVEYE
RVKGSFKVTP ESLIGAKDTL IILHPLPRVD EVDHRLDSTR YARYFRQSAL GVPLRMALLK
LVLKGD