Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1651 |
Symbol | |
ID | 5709844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1726430 |
End bp | 1726981 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641276159 |
Product | hypothetical protein |
Protein accession | YP_001541464 |
Protein GI | 159042212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.377631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000228692 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGGAGT ACGTTAACGT ATATAGGGAA CTCATTAAGG TTCTTGAGGA GAGGTTCAAC CACTATAAGG AGGGTGTTAA GAGGCTTGAC GAGGCTTGGG CCAGTTACAG GAATGCTGTT AATGACTTGA AGAAGGAGTG GGATAGCGAG TACCCGCTCA TTGAGTCTAG GGTTAATCAA CTTAGGAATG GGATAGATGG GCTGAGGAAG CAGATTGAGG AGGTTGAGGT TAAGAGGGAG ATTGGGTTAA TTGATGATGA ATCATACAAT AAGTTAATCA CTGAATTAAA CAATGCTATG AGTGAATTAA GTAAAATGTA TGATGAGGCT AAGGGACTGT TGAATGAACT TGAAAGCGGC CTAATGAACC ATTGGATAAG GTCAATAGAC GTCTCAGTAG TATCCCAGGA CACCGTGGAG AATCTGGCTA AGAACCTTGA GGAGGCTAAG GCAAATGGAC AGATAAGTGA GGAAACCTAC AATAGGCTTA AGAGGGACCT TAACCTACTC ATTAAGGCGC TTCAAGCATA CTCACTACTG TTAAAGAGTT AA
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Protein sequence | MEEYVNVYRE LIKVLEERFN HYKEGVKRLD EAWASYRNAV NDLKKEWDSE YPLIESRVNQ LRNGIDGLRK QIEEVEVKRE IGLIDDESYN KLITELNNAM SELSKMYDEA KGLLNELESG LMNHWIRSID VSVVSQDTVE NLAKNLEEAK ANGQISEETY NRLKRDLNLL IKALQAYSLL LKS
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