Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1650 |
Symbol | |
ID | 5709843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1725678 |
End bp | 1726430 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641276158 |
Product | hypothetical protein |
Protein accession | YP_001541463 |
Protein GI | 159042211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000525243 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAAACG TTTGCCCATT GCTTAAAAAG ACTGAGGGAG GTTACATCTG CGGTGCGGTG GATCGCACCG TTAATCCTGA GGCTTGGTAC TGCTTCATGG ATTACCCATC ATGTCCATTA TACATTAATT ACATTAGGAG ACAGAGGAGC CAGGAAACCC AGGTTGTGGC ACAGACCCAG CAGGCTACAA CCGAGGTTAA GCCAATAGTT ACTGTTACCC AACAGGCGCC GGTTAGGACA GCCATTAGTG AACCTGAGGA TGAAGCCGTC AGTAAGTTGA GGAGTATTCT TGATTCAATG CAGGGGAGGG TTAAGGCACT TGATGAGACT TGGAGGGATT ACGAGGATAA GGCTAATACT GCTAAGAGTG AGTTAGATAA GAATGAACAC TTGATAATGC AGTACATAGC ATCCCTTGAG GGTATTAAGG CTAACCTTGA GGAATCCATT AAGGAGCTTG AGTATAGGAG GAATGCGGGT ATTATTGATG AGGAGTCTTA CAATAAGGCT AGGGAGTATG TTGATAAGAG GCTTAGTAAT GTTTCCCAGC AACTCAGTGA AATGAAGGAG ATGTTTAATA AGATTCAGGA ATCAATATTA ATGCATTATA AGAGGGTTCT ATCAGAGAGC ACTGAGGCTG CTAAGGTTAA GTTATCACTG GCTAAGCTTG AGGAACTCTA TAGGACAGGT AAGGTGAGTA AGGAGGTTTA CGAGAAGATA AAGGCTCAAT TAGCCGTAAT AGGTGGTCAG TAA
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Protein sequence | MRNVCPLLKK TEGGYICGAV DRTVNPEAWY CFMDYPSCPL YINYIRRQRS QETQVVAQTQ QATTEVKPIV TVTQQAPVRT AISEPEDEAV SKLRSILDSM QGRVKALDET WRDYEDKANT AKSELDKNEH LIMQYIASLE GIKANLEESI KELEYRRNAG IIDEESYNKA REYVDKRLSN VSQQLSEMKE MFNKIQESIL MHYKRVLSES TEAAKVKLSL AKLEELYRTG KVSKEVYEKI KAQLAVIGGQ
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