Gene Cmaq_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1650 
Symbol 
ID5709843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1725678 
End bp1726430 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID641276158 
Producthypothetical protein 
Protein accessionYP_001541463 
Protein GI159042211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000525243 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAACG TTTGCCCATT GCTTAAAAAG ACTGAGGGAG GTTACATCTG CGGTGCGGTG 
GATCGCACCG TTAATCCTGA GGCTTGGTAC TGCTTCATGG ATTACCCATC ATGTCCATTA
TACATTAATT ACATTAGGAG ACAGAGGAGC CAGGAAACCC AGGTTGTGGC ACAGACCCAG
CAGGCTACAA CCGAGGTTAA GCCAATAGTT ACTGTTACCC AACAGGCGCC GGTTAGGACA
GCCATTAGTG AACCTGAGGA TGAAGCCGTC AGTAAGTTGA GGAGTATTCT TGATTCAATG
CAGGGGAGGG TTAAGGCACT TGATGAGACT TGGAGGGATT ACGAGGATAA GGCTAATACT
GCTAAGAGTG AGTTAGATAA GAATGAACAC TTGATAATGC AGTACATAGC ATCCCTTGAG
GGTATTAAGG CTAACCTTGA GGAATCCATT AAGGAGCTTG AGTATAGGAG GAATGCGGGT
ATTATTGATG AGGAGTCTTA CAATAAGGCT AGGGAGTATG TTGATAAGAG GCTTAGTAAT
GTTTCCCAGC AACTCAGTGA AATGAAGGAG ATGTTTAATA AGATTCAGGA ATCAATATTA
ATGCATTATA AGAGGGTTCT ATCAGAGAGC ACTGAGGCTG CTAAGGTTAA GTTATCACTG
GCTAAGCTTG AGGAACTCTA TAGGACAGGT AAGGTGAGTA AGGAGGTTTA CGAGAAGATA
AAGGCTCAAT TAGCCGTAAT AGGTGGTCAG TAA
 
Protein sequence
MRNVCPLLKK TEGGYICGAV DRTVNPEAWY CFMDYPSCPL YINYIRRQRS QETQVVAQTQ 
QATTEVKPIV TVTQQAPVRT AISEPEDEAV SKLRSILDSM QGRVKALDET WRDYEDKANT
AKSELDKNEH LIMQYIASLE GIKANLEESI KELEYRRNAG IIDEESYNKA REYVDKRLSN
VSQQLSEMKE MFNKIQESIL MHYKRVLSES TEAAKVKLSL AKLEELYRTG KVSKEVYEKI
KAQLAVIGGQ