| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1649 |
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| Symbol | |
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| ID | 5709548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1724885 |
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| End bp | 1725514 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641276157 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001541462 |
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| Protein GI | 159042210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00048269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGTA GTGGGCCACA GGGGGAGGAT GATGAATTAG CTGAAATCAA CAGTGAGGTG
AGTAACTGCA GGAAGTGCCC ACTGTACTTG AGTAGAAAGA AGGCTGTACC AGGTGAGGGT
AATCCGAGGG CTGAGGTTAT GTTAATTGGG GAGGCGCCAG GTAGGGTTGA GGATGAGACT
GGTAGACCGT TTGTTGGTGC CGCTGGTAAG CTGCTTGATG AATTGCTTCA TGAGATTGGG
GTTGATAGGG GTAACTTATA TATAACTAAT GTAGTTAAGT GTAGGCCACC TAATAATAGG
GATCCAACTG AGGAGGAGAT TAATGCTTGT AAACCATACT TAATTAGGCA AATAGCCGTG
GTTAGGCCTA GGAAGATAAT AACCCTGGGT AGGCATAGTA CTAGAGTAAT ACTTAGCCTC
AATGGGTTAG GCTTCAGTGA GTTGGCTAAG GTTAGGGGTA AGGTGTTTAA GGTTAATATC
GCTGGTGTTA ATGCTGATGT TTACCCAACC TACCACCCAG CGGCCGCGTT ATATAATCCA
TCGGTGAGAA ACTTGATTAA GGAGGATTTA GCTAAGGCGT TTAATGCCAG TAAGGGTGGT
TCAAGCATTT TAGATTACCT TAATGGCTAA
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| Protein sequence | MNRSGPQGED DELAEINSEV SNCRKCPLYL SRKKAVPGEG NPRAEVMLIG EAPGRVEDET
GRPFVGAAGK LLDELLHEIG VDRGNLYITN VVKCRPPNNR DPTEEEINAC KPYLIRQIAV
VRPRKIITLG RHSTRVILSL NGLGFSELAK VRGKVFKVNI AGVNADVYPT YHPAAALYNP
SVRNLIKEDL AKAFNASKGG SSILDYLNG
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