| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1632 |
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| Symbol | |
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| ID | 5709237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1707159 |
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| End bp | 1708019 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641276140 |
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| Product | zinc finger TFIIB-type domain-containing protein |
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| Protein accession | YP_001541445 |
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| Protein GI | 159042193 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.178944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGT GCCCAGCATG TGGTTCAAGT GAATTCATCT ACGACGAGTA CAGTGGTACA
GTTTACTGTG CTAAGTGCGG TTACGTATTG AGTGAACATG AAATAGATAA GGGGCCTGAG
TGGAGGGGGG TTGATAAGAA TGGTAAATCT TTATCAAGAG CCAGTCCTGT AAGCGCTTCA
TCACCTGGAT TCAACATGTA CGTTAACATA GTTAGTGTTA ATAGGCCTAA GTTTAGGATA
ATACCATCAT TATCATTATT CAACTCCAGT GAACGCAATG TAATGATGCT TAGATCCATA
GCTAAGCAGG TTATAGCTAA TGCTGGTTTA CCTGAATCAA TACTGGATGA GGTTGTGTTA
AACTATAGGT TACTAATGAA AATGAATTAC AGGGGTAAGA TTAAGGAGAC TGCGGTGGCT
TTAGTTTACA TAGCGTGTAG GAGACGTAAC TTACCATGCA CCATGAAGGA CCTGCTCAGG
AACAGTGACG TTGATATTAA GGGCTTCAAT AAGGCTTACA TGCATATAGC TAATTTAATG
AACATTAAGG GTATTTATAA TGATGAGCAG TTAATCAACA TGACCTTAAG GATAGTTAAC
ATGATTAACA TCAATAGTAA TATTAAACAT AAATTAATGC TACTGATAAG GGATATGATA
GATAAGGGTA AGGCAACCAG CTTGTTCAAT GGTAAGACGT TTACATCAAC AATAGCAGCC
ATGGTGTATT TATCATTATT AATATATAAT GTTAAAATTA GGCAAAGGGA AATAGCCTCA
ATGGCCGGGG TCACGGATGT AACGATAAGG AATAGGTATA ATGAATTACT GAAACGCCTA
AACTTCAGGG TAATCATTTA A
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| Protein sequence | MNKCPACGSS EFIYDEYSGT VYCAKCGYVL SEHEIDKGPE WRGVDKNGKS LSRASPVSAS
SPGFNMYVNI VSVNRPKFRI IPSLSLFNSS ERNVMMLRSI AKQVIANAGL PESILDEVVL
NYRLLMKMNY RGKIKETAVA LVYIACRRRN LPCTMKDLLR NSDVDIKGFN KAYMHIANLM
NIKGIYNDEQ LINMTLRIVN MININSNIKH KLMLLIRDMI DKGKATSLFN GKTFTSTIAA
MVYLSLLIYN VKIRQREIAS MAGVTDVTIR NRYNELLKRL NFRVII
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