Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1624 |
Symbol | |
ID | 5708617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1698672 |
End bp | 1700147 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641276132 |
Product | malate dehydrogenase |
Protein accession | YP_001541437 |
Protein GI | 159042185 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000777007 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.838633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTAG AATGTGAAGT AACTCAATAT GTTTATAAGG GGTACTATGG ATGGGGGATA ATGTTTAGGG AGAAGATTCC TATCAAGGGA TTAGCGGTAA CATTTAATGA CGTAGTTCTA TTGCCAGGTA AGGCTACCCT GGATCCAATA AGCATTGATA CATCGACCAA GGTGTCTAGA AGTGTTTCAA TAAACATACC ATTGGTTTCA TCACCAATGG ATACTGTGAC GGAGGATGCA TTAGCCATAG CCCTAGCCAG GCTGGGTGGT GTAGGTGTTA TTCACAGGAA CATGACTATT AACGATGAGG TTAACGCCGT TAAGGCTGTT AAGGATGCTT CACCATACCC AGTAATCCCA TTTTCACTGA ATCCATTAAT GAGCAGTGAG GAGGCTATGG CTGAGTTAAG GAGGCTTAAC CTCGATACCC TACCCATTGT TGACGAGGGT AGGGTGATTG GGTATATTAG GAGGTCCAGG TTATTGACTG GTGGTAGGTT GATTGAGCTA GCTGAGAAGC CAGTAATGGC TCCAGTGGGG TCTAGTGGTG ATGAGTTGGT TAAAATAATG AGGGAGAATG GTACGGATAC CGTGGCCTTA GTGGATAAGG ATAATGTATT CATCGGCATC GCCTCATACT ATGACTTAAA CTATAAACCA CCCTTTAAAC CAGCCACTGA TGGTGAGGGG AGGCTTATTG TTGGTGCCGC AGTATCCCCA TTTGATGTGG AGAGGGCGGT TAAAGTAAGC AAATACGCAG ACTTCCTGGT CGTAGACGTG GCCCATGTGG ATAATGAAAA TGCCTTAACC GCATTAGCTA AGTTGGTTAA GGAAACCCCA GTGGACGTGA TTGTGGGTAA CCTAGGCACC TATGATGGCG CCGTTGATGC AATAACCAGG GTTGACCCAA TTGGTGGATT CAGGGTTGGA ATAGCCAGTG GTTCAATATG CAGTACAGGG GTTGTTACCG GTGTCGCTGC ACCAACATTA TGGGCTGTTG CCCAAGTGGC TGATGCGGCA CTTGATTATG GTTTAGGCAG TACACCGATT ATAGCTGATG GGGGTATTAG GGAGCCTGGT GATGTGGTTA AGGCCATGGC TGCTGGGGCA TGGGCCGCAA TGATGGGTAG GGTGTTTGCG CAGGCCACGG AGTCCCCGAG CCCAATAATA AGGGTTGGTA ATAGGCTGTA CAAGTACTAT AGGGGCATGG CCAGTGAGGG TGCTAGGGCA AGGAGGTTCG CCATGGATAG GTACGCACCC AAGGTTAAGA ATATTGAGGA GGGTGTTGAA GGCCTAGTAC CCTATAGGGG TGACTTAGCC AACATAGTGA GGGAGTTCGT GGGTGGGATC CAGGCAGCCT TAGGCTACAT TGGTGCATCT AATACCGCTG AGGCAAGGGT TAAGGGCAGG TTCATGATTG TGACCGAGTC AGGTAGGGGT GAGGTTGAGC CGCATGACCT TGTCTTAAAC ATATAG
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Protein sequence | MGLECEVTQY VYKGYYGWGI MFREKIPIKG LAVTFNDVVL LPGKATLDPI SIDTSTKVSR SVSINIPLVS SPMDTVTEDA LAIALARLGG VGVIHRNMTI NDEVNAVKAV KDASPYPVIP FSLNPLMSSE EAMAELRRLN LDTLPIVDEG RVIGYIRRSR LLTGGRLIEL AEKPVMAPVG SSGDELVKIM RENGTDTVAL VDKDNVFIGI ASYYDLNYKP PFKPATDGEG RLIVGAAVSP FDVERAVKVS KYADFLVVDV AHVDNENALT ALAKLVKETP VDVIVGNLGT YDGAVDAITR VDPIGGFRVG IASGSICSTG VVTGVAAPTL WAVAQVADAA LDYGLGSTPI IADGGIREPG DVVKAMAAGA WAAMMGRVFA QATESPSPII RVGNRLYKYY RGMASEGARA RRFAMDRYAP KVKNIEEGVE GLVPYRGDLA NIVREFVGGI QAALGYIGAS NTAEARVKGR FMIVTESGRG EVEPHDLVLN I
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