Gene Cmaq_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1624 
Symbol 
ID5708617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1698672 
End bp1700147 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content48% 
IMG OID641276132 
Productmalate dehydrogenase 
Protein accessionYP_001541437 
Protein GI159042185 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000777007 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.838633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAG AATGTGAAGT AACTCAATAT GTTTATAAGG GGTACTATGG ATGGGGGATA 
ATGTTTAGGG AGAAGATTCC TATCAAGGGA TTAGCGGTAA CATTTAATGA CGTAGTTCTA
TTGCCAGGTA AGGCTACCCT GGATCCAATA AGCATTGATA CATCGACCAA GGTGTCTAGA
AGTGTTTCAA TAAACATACC ATTGGTTTCA TCACCAATGG ATACTGTGAC GGAGGATGCA
TTAGCCATAG CCCTAGCCAG GCTGGGTGGT GTAGGTGTTA TTCACAGGAA CATGACTATT
AACGATGAGG TTAACGCCGT TAAGGCTGTT AAGGATGCTT CACCATACCC AGTAATCCCA
TTTTCACTGA ATCCATTAAT GAGCAGTGAG GAGGCTATGG CTGAGTTAAG GAGGCTTAAC
CTCGATACCC TACCCATTGT TGACGAGGGT AGGGTGATTG GGTATATTAG GAGGTCCAGG
TTATTGACTG GTGGTAGGTT GATTGAGCTA GCTGAGAAGC CAGTAATGGC TCCAGTGGGG
TCTAGTGGTG ATGAGTTGGT TAAAATAATG AGGGAGAATG GTACGGATAC CGTGGCCTTA
GTGGATAAGG ATAATGTATT CATCGGCATC GCCTCATACT ATGACTTAAA CTATAAACCA
CCCTTTAAAC CAGCCACTGA TGGTGAGGGG AGGCTTATTG TTGGTGCCGC AGTATCCCCA
TTTGATGTGG AGAGGGCGGT TAAAGTAAGC AAATACGCAG ACTTCCTGGT CGTAGACGTG
GCCCATGTGG ATAATGAAAA TGCCTTAACC GCATTAGCTA AGTTGGTTAA GGAAACCCCA
GTGGACGTGA TTGTGGGTAA CCTAGGCACC TATGATGGCG CCGTTGATGC AATAACCAGG
GTTGACCCAA TTGGTGGATT CAGGGTTGGA ATAGCCAGTG GTTCAATATG CAGTACAGGG
GTTGTTACCG GTGTCGCTGC ACCAACATTA TGGGCTGTTG CCCAAGTGGC TGATGCGGCA
CTTGATTATG GTTTAGGCAG TACACCGATT ATAGCTGATG GGGGTATTAG GGAGCCTGGT
GATGTGGTTA AGGCCATGGC TGCTGGGGCA TGGGCCGCAA TGATGGGTAG GGTGTTTGCG
CAGGCCACGG AGTCCCCGAG CCCAATAATA AGGGTTGGTA ATAGGCTGTA CAAGTACTAT
AGGGGCATGG CCAGTGAGGG TGCTAGGGCA AGGAGGTTCG CCATGGATAG GTACGCACCC
AAGGTTAAGA ATATTGAGGA GGGTGTTGAA GGCCTAGTAC CCTATAGGGG TGACTTAGCC
AACATAGTGA GGGAGTTCGT GGGTGGGATC CAGGCAGCCT TAGGCTACAT TGGTGCATCT
AATACCGCTG AGGCAAGGGT TAAGGGCAGG TTCATGATTG TGACCGAGTC AGGTAGGGGT
GAGGTTGAGC CGCATGACCT TGTCTTAAAC ATATAG
 
Protein sequence
MGLECEVTQY VYKGYYGWGI MFREKIPIKG LAVTFNDVVL LPGKATLDPI SIDTSTKVSR 
SVSINIPLVS SPMDTVTEDA LAIALARLGG VGVIHRNMTI NDEVNAVKAV KDASPYPVIP
FSLNPLMSSE EAMAELRRLN LDTLPIVDEG RVIGYIRRSR LLTGGRLIEL AEKPVMAPVG
SSGDELVKIM RENGTDTVAL VDKDNVFIGI ASYYDLNYKP PFKPATDGEG RLIVGAAVSP
FDVERAVKVS KYADFLVVDV AHVDNENALT ALAKLVKETP VDVIVGNLGT YDGAVDAITR
VDPIGGFRVG IASGSICSTG VVTGVAAPTL WAVAQVADAA LDYGLGSTPI IADGGIREPG
DVVKAMAAGA WAAMMGRVFA QATESPSPII RVGNRLYKYY RGMASEGARA RRFAMDRYAP
KVKNIEEGVE GLVPYRGDLA NIVREFVGGI QAALGYIGAS NTAEARVKGR FMIVTESGRG
EVEPHDLVLN I