Gene Cmaq_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1607 
Symbol 
ID5708658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1678876 
End bp1679931 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content37% 
IMG OID641276115 
Producthypothetical protein 
Protein accessionYP_001541420 
Protein GI159042168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.32867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGTA AATACATACT ATTACTTGGA TTATTGCTTT CACTCATATT ACCTGGAATT 
ACAGCTAATG CCCAGGCAAC TGCATCAACA CCCAACTTCA TTATTTACAA TGAGGTAAAC
GCGAGCAGTA AGTTCATAGG TGAGTTAAGT TACTTTATTC AATACGTGTA CAATGACTAT
GTGATTAATA ATAAGTTAAG CATGATGCAG CCATGTAATG GCTCAAAGTA CATTGTCTAT
GTCACCAATA ATGTAAGTAA CCTAGGAGGT TACGTATCCT ATGGTCCACT TTGCATTAAT
TACATTGAAT TCAGCAGTAG CGCTAACATA CCTTACTCAG TGTACTATGT ACTGCTTCAC
ATGACTAGTT ACTTCGCTGA GGCCCCAAAC TATGATTCAA CATGGTATGG TGTGGCTTCA
TCAATAGGCT TAACCGAATA CTTTAGTAAA ATATGCAACT ACGTTAATCT ATTCTTCATT
AACCAATACT GGTTAAGGAA CCCGTATGAT TACTTCAACC AATACCCATA CTACGGTGCA
TTCCCCTACG GTGCCTTATT CTATTGGTTA ATGAACCAGT ATACGCCACA ATTCATATTA
ACAATGACCC TTAATTCGAC TCAGTTGGTA AGTGCTTGGG TTGATGTTGA GTATGTTATC
TTCTTAACGT CGATAGTTCA TGGAGTTTAC CTATGCGGTA CCTTATATAA ACCATCCTTC
TCAGTAATTA GCCCCAATAG TACCCTATAC TTAGTTATGC CTGGTTTAAC AGCAAGATAC
TTCGTGATTA ATGGATTAAT TAACGGTGCT TTAACAATTA ATGCATATGG TAATGTGACA
AGTGATGTGG TTATTAATGA GACAATATTC GTAACAAATG GTTCAGTCTA CGTAGCACTA
GTGAACCCTA CCTTGAGTCA GGAATTGGTT AAAGTGGTTG TGACGTATCA TGGAAGCACA
ATTAGTGGAT TCACTAACCA GTACCTGATA CTTATCTTAG CCGTAATGAT GTTGTTCTTC
ATAATTATAC TTACAATTGA ATTAAGGAGA CGTTGA
 
Protein sequence
MLGKYILLLG LLLSLILPGI TANAQATAST PNFIIYNEVN ASSKFIGELS YFIQYVYNDY 
VINNKLSMMQ PCNGSKYIVY VTNNVSNLGG YVSYGPLCIN YIEFSSSANI PYSVYYVLLH
MTSYFAEAPN YDSTWYGVAS SIGLTEYFSK ICNYVNLFFI NQYWLRNPYD YFNQYPYYGA
FPYGALFYWL MNQYTPQFIL TMTLNSTQLV SAWVDVEYVI FLTSIVHGVY LCGTLYKPSF
SVISPNSTLY LVMPGLTARY FVINGLINGA LTINAYGNVT SDVVINETIF VTNGSVYVAL
VNPTLSQELV KVVVTYHGST ISGFTNQYLI LILAVMMLFF IIILTIELRR R