| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1580 |
|---|
| Symbol | |
|---|
| ID | 5709027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1653833 |
|---|
| End bp | 1654264 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641276088 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541393 |
|---|
| Protein GI | 159042141 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1371] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.986242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC CTGCGTTTGA GTACGGTGAC CATACGGCGG ATATACTCGT CATAGCGTAT
GGTCAATCCC TGCCTGAGGC CTTTAAGAAC GCTGCCCTAG GGGTCTTGAA CATTATGTAT
GATACATCGA GGGTTAATCC CATTGATAAG GTTGATGTGG AGGTTTACGG TGATGACTTA
GAGCAATTAC TCTTTAATTG GATAGATGAG GTTATTTACT GGTTTGACGG TAGAAAGATG
GCTATTGGCA ACATAATTAT TAGTGAACTT AATGAAGATA AGCCTAAAAT TAAGGCGATA
TTAATGGGGG AGCATTATGA TGTGGGGAAG CATGGCTTCA AGGGTACTAT TGTTAAGGCA
ATGACCTACA ACATGATGAG TATCGAAAGG ATTAATGGGG AATTCAAGGT GCAGTTCGTA
GTGGATATTT AG
|
|---|
| Protein sequence | MKHPAFEYGD HTADILVIAY GQSLPEAFKN AALGVLNIMY DTSRVNPIDK VDVEVYGDDL
EQLLFNWIDE VIYWFDGRKM AIGNIIISEL NEDKPKIKAI LMGEHYDVGK HGFKGTIVKA
MTYNMMSIER INGEFKVQFV VDI
|
|---|
| |