| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1578 |
|---|
| Symbol | |
|---|
| ID | 5709025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1651857 |
|---|
| End bp | 1652702 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641276086 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001541391 |
|---|
| Protein GI | 159042139 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0586561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGG AGTATAAGAC CTTTAGGGGT GATTTAAAAA TGCCTGTAAT AGGACTTGGA
ACATGGGGAA TCGGGGGAGG CTACTGGACC CCAGATTGCT CACGTAAAGC CGAGTGGGTT
GCACTCATAA GGCGAGCTAT TGAATTAGGC TACAGGATGT TTGATACTGC TGAAATGTAC
GGTGGAGGAT GCTCTGAGGA GATTATTGGT AGTGCTGTTT CTGGTTTTTC TCGTGATGAT
TTGTTTATTA TTAGTAAGGT TTGGCCTACT CATGCTTCTT TTAATGATGT TTTGAGGAGT
GCTAGGGCTA GTGTTGGTAG GCTTGGTACT TTCATTGACC TATACCTCCT CCACTGGCCT
AGTCGTGAGG TGCCTATTGC TGAGACTATT AGGGCTTTTG AGAGGCTTAT TGATGATGGT
TTAATTAGGT TCATGGGTGT TAGTAATTTT GATTCAACCG CCTTAATGGA GGCTATGAGT
GCTGCTAAGA AGTATGAGAT TGTTGCTGAT GAGGTTAAGT ATAATTTAAC GGATAGGTTC
ATTGAGAGGG ATTTAATGCC AATAGCCGTT AAGGAGAATA TAGCCATAAT AGCCTACAGC
CCACTGGGCA CCGGTAACCT ACTAAACCCA AGTAACCCAG GCTACAGTGT GTTAAAGACC
ATAGCCGATA AGTACGGTAA AACACCGGCA CAAGTGGCGT TAAACTGGTT AATAAGCAAA
CCAAACACAG TGGCGATACC AAAGGCAACA AGGGAGGAGC ATTTAAGGGA GAACCTAGGG
GCATTAGGAT GGAGAATAAA CCAAGAAGAC CAAAAACAAC TAGAACAAGC ATACCCAATA
ACTTGA
|
|---|
| Protein sequence | MEMEYKTFRG DLKMPVIGLG TWGIGGGYWT PDCSRKAEWV ALIRRAIELG YRMFDTAEMY
GGGCSEEIIG SAVSGFSRDD LFIISKVWPT HASFNDVLRS ARASVGRLGT FIDLYLLHWP
SREVPIAETI RAFERLIDDG LIRFMGVSNF DSTALMEAMS AAKKYEIVAD EVKYNLTDRF
IERDLMPIAV KENIAIIAYS PLGTGNLLNP SNPGYSVLKT IADKYGKTPA QVALNWLISK
PNTVAIPKAT REEHLRENLG ALGWRINQED QKQLEQAYPI T
|
|---|
| |