Gene Cmaq_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1530 
Symbol 
ID5709197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1613023 
End bp1613727 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID641276038 
Productputative ATP binding protein 
Protein accessionYP_001541343 
Protein GI159042091 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00289] conserved hypothetical protein TIGR00289
[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCA TCTGTGCCCT ATTCTCAGGG GGTAAGGATT CAACCTACGC CATTCATTGG 
GCTATTATGC ATGGATTCGA CGTTAAGTGC CTGGTTACCT TAATGCCCAG TAGGGAGGAT
TCCTGGATGT TCCATAAGCC AGCTATTGAG TATACTAGGC TTCAGGCAGA GTCCATGGGG
ATTAGGCAGA TAATTGAAGC CACCAGTGGG GTTAGGGGTG AGGAATTAGT TGACTTAAGG
AGGGCTTTAA AGAGGGCTAT GGATGAATGC GGAGTCACCG GTGTAGTTAC TGGTGCATTA
CTCTCAGATT ACCAGAGGAT GAACATTAAC ATGATTTCCG AGGAATTGAA GATAAAGGCG
TACTCCCCAC TTTGGAGGAA GAACCAGGCT AAATACCTCA TGGAGCTTCA TGATGCTGGT
CTAAGATTCA TAGTAACCTC AATAGATGCA TACGGCCTCA ACCCGCGATT ACTGGGTAAG
GTTTTAGATA AAACGGACAT AGAGTACATT ATTGAATCAG CGCAGAGATA CGGCTTCAAC
CCAGCCTTTG AGGGGGGTGA GGCGGAGACC TTCGTTGTTG ATGCCCCATT ATTCAGGAGA
AGCATTAAGG TAAGGGGTTA TGTTAAGAGG GTTGGGGAGT ATTCGTGGAG ATTCATAATA
ACTGATGCAT TACTTGAAGG TAAACTACCT CACCTTGGAG GGTGA
 
Protein sequence
MRPICALFSG GKDSTYAIHW AIMHGFDVKC LVTLMPSRED SWMFHKPAIE YTRLQAESMG 
IRQIIEATSG VRGEELVDLR RALKRAMDEC GVTGVVTGAL LSDYQRMNIN MISEELKIKA
YSPLWRKNQA KYLMELHDAG LRFIVTSIDA YGLNPRLLGK VLDKTDIEYI IESAQRYGFN
PAFEGGEAET FVVDAPLFRR SIKVRGYVKR VGEYSWRFII TDALLEGKLP HLGG