| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1529 |
|---|
| Symbol | |
|---|
| ID | 5709196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1612667 |
|---|
| End bp | 1612906 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641276037 |
|---|
| Product | like-Sm ribonucleoprotein core |
|---|
| Protein accession | YP_001541342 |
|---|
| Protein GI | 159042090 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTA GGTGTATGAA GTTCGTTCAA GACGAGTTAA GCTCAGTGGT GGGAAGCACG
GTGCTGGTTA AGTTAAGGGA TGGTACAACC ATAAGGGGTA CCTTGAAGAA CTATGACCAG
CACATGAATC TACTGCTGGA TGACACAGAG GAGATAATAG ACCCTAAGAC ATCCATTAAG
AGGGGTATGG TTGTGATAAG AGGGGACACT GTTCTCTTCG TATCGCCAAT AACAACATAG
|
|---|
| Protein sequence | MASRCMKFVQ DELSSVVGST VLVKLRDGTT IRGTLKNYDQ HMNLLLDDTE EIIDPKTSIK
RGMVVIRGDT VLFVSPITT
|
|---|
| |