Gene Cmaq_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1498 
Symbol 
ID5709139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1576970 
End bp1577842 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content44% 
IMG OID641276007 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001541312 
Protein GI159042060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.76809e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGTAT GTTGTGGTAA TGTTTTAAAG TTGGGGTGTT GTGCCTTGGG TGTGCGTTTG 
GGTATTCAGG TTGGTGCTAG TTTGGTTAGG GGTGGGTTGA TGAGTCTTGG TGAGGCTATT
GCTGTGCTTT ACCTGAGTCC GTTTAGGGGT ATTGAGGTTA ATCAGGCTTA CTTAACTGCC
TTTGGTGGTG TTGAGGAGTT TGGGCGTAGG TTGAGTAGGT TTGATATTGA GCTTGCTGGT
GTTTATTGGT CTGCTAAGTT CCACTTGAGG GAGGAGCATG ATTTCATAAT TAGGGAGTTT
AGGGTGATTA AGGATAGGTT AAGTAAACTT AATTCACGCA ACATTATTAT CGGGCCACCC
TCAAGGTTTA GGCTTTTTGA GGGTAATAGG GAGAGGTATG TTGAGGCTAT GGCTGAAGTC
CTTAATAGGA TTATTGAGGA GGCTGGTGAC GTTAGGCTTG GTGTTCATAA TCACTGGGGT
ACTATTATTC AAAATGAGGA TGAAATAAAC CTACTCATGA AGCTCACAGA CCCCAGGCTT
CAACTATACC CTGATATAGG GCACTTATCG GTGACCGGTA TTGACGTGTA TGGTTTCCTA
GGTAAGTGGA GTGGTAGGAT TGGTTACATT CACCTTAAGG ATGACTCAGA ACCCCTTAAG
CCAGCTGGGG ATTGGGGTGA GGTGGCTGGT AGATTCAAGG TGCCTGGTAA GGGAAGGCTG
GATATTGCTA GGATTCTAAA CATACTTAAG AGCAATGGCT TCAACGGCTG GGTGACCGTT
GAGTACGAGG ACCCTGGGTC GGATCCATTA AGTGACTTAA GGTTCTTCAT TAAGTATTAT
AATGAGAATT TAAGGGGCTT CTTTGAGGAT TAA
 
Protein sequence
MFVCCGNVLK LGCCALGVRL GIQVGASLVR GGLMSLGEAI AVLYLSPFRG IEVNQAYLTA 
FGGVEEFGRR LSRFDIELAG VYWSAKFHLR EEHDFIIREF RVIKDRLSKL NSRNIIIGPP
SRFRLFEGNR ERYVEAMAEV LNRIIEEAGD VRLGVHNHWG TIIQNEDEIN LLMKLTDPRL
QLYPDIGHLS VTGIDVYGFL GKWSGRIGYI HLKDDSEPLK PAGDWGEVAG RFKVPGKGRL
DIARILNILK SNGFNGWVTV EYEDPGSDPL SDLRFFIKYY NENLRGFFED