Gene Cmaq_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1488 
Symbol 
ID5709879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1565440 
End bp1565754 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content50% 
IMG OID641275997 
Productregulatory protein ArsR 
Protein accessionYP_001541302 
Protein GI159042050 
COG category[K] Transcription 
COG ID[COG4189] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.486972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.347049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA AGAGACTGGA GGAAATGGCC TCCATAATGG ATGGCCTAGG CCATCCGTTG 
CGGTTAAGGA TAATAGCAAT ACTGGCCATG AATGGCTCGC TTTACCTATC GGATATAGCG
AAGAGACTGG GAGTGAGCCG GGCCTTGGCA AAGGTTCACT TGGTGAAGCT GCAGAAGGCA
GGCTTGGTGA GAAGCAGCGT GAGATTGATG GATGGAGAGG CAAAGGCATT GAGGTATTAC
GAATTAGTGG ACTTCAATAT AACCGTGAAT CCCCGCATAA TAGTGGAACT GGCGGGTGGT
GGAGATGAGC AGTAA
 
Protein sequence
MGKKRLEEMA SIMDGLGHPL RLRIIAILAM NGSLYLSDIA KRLGVSRALA KVHLVKLQKA 
GLVRSSVRLM DGEAKALRYY ELVDFNITVN PRIIVELAGG GDEQ