| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1426 |
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| Symbol | |
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| ID | 5709322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1506555 |
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| End bp | 1507421 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275936 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001541241 |
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| Protein GI | 159041989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.41063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00349813 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAATAC TTGTGACTGG GGTTAGTTCA TCACCGGGCT ATAAGACTGC TGTTAAATTG
GCTGGGATTC ATGAGGTTAT TGGTGTCTAT AATGAGCACC CTGTTAATGT GCCTAATGCC
ACTGTGGTTA AGGCTGATTT AACTAAGGAT GCCTCAAGGT TGATTAATGA ATATAAGCCC
AATGTAGTTA TTCACACGGC TGCCGTGGGT AATGTTGACC AGTGTGAGGA TCAACCTGAC
TTATGCTATA GGGTTAATGT TGAGACCTCA AGGATACTCC TCAGGGAGGC TTATAGGGTT
GGTTCAGCAA TATACTACTT ATCAACGGAC TACGTCTTCG ATGGTGAGAG GGGACTGTAT
AATGAGGATG ATGCCCCAAG GCCAATTAAC TACTACGGTT TAAGTAAGCT ATTGGCCGAG
GAGATAACTA GGGCCCTGGG TGGCTCAATT ATTAGGGTTG CCTGGGTTTA CGGCACTGGG
CCTGGTAGGG TGAATTTCGG TAGGACTGTG GTTGAGAAGC TTTCAAGGGG TGAGGTGGTT
AATGCCATTA TTGATCAGTG GTCTTCACCA ACATTAAACA CCATAATTGG TGAGGCAATG
CTTAGGCTAG TGGAGTCAAG GTTCACTGGG GTTCTTCACG TAACCGGCCC TAGGATGAGT
AGGTTTGATT TCGCTAAGGC CATAGCCAGG TACTTTAAGT TTAATGAGGA TTTGGTTAAA
CCAATTAGGC TGAGTGATGT TAATTATAAG GCTAGGAGAC CGAGGGATAG TAGCTTAAGC
AATAAGAGGG CTTTAGGCAT CTTGAACATA CCGTTGAATG ACATAGATTA CGCATTATCA
ATATTCAAGA GTGAACTAGG CATCTGA
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| Protein sequence | MIILVTGVSS SPGYKTAVKL AGIHEVIGVY NEHPVNVPNA TVVKADLTKD ASRLINEYKP
NVVIHTAAVG NVDQCEDQPD LCYRVNVETS RILLREAYRV GSAIYYLSTD YVFDGERGLY
NEDDAPRPIN YYGLSKLLAE EITRALGGSI IRVAWVYGTG PGRVNFGRTV VEKLSRGEVV
NAIIDQWSSP TLNTIIGEAM LRLVESRFTG VLHVTGPRMS RFDFAKAIAR YFKFNEDLVK
PIRLSDVNYK ARRPRDSSLS NKRALGILNI PLNDIDYALS IFKSELGI
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