| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1371 |
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| Symbol | |
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| ID | 5709866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1444760 |
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| End bp | 1446580 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275881 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001541187 |
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| Protein GI | 159041935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCTACG TGAGGGCTTT ACTTGATGTT GATAGCCCAG TGCATAAGGT GGGGGATGAG
GTTGGGGTTA AGGTTAGGTT GATTAATGAT TCATCATCAT CAATAAACGT TAACATAACC
CTCGACTACC TACTGGAGGG TAGGCACGTT AACTCATGGA CTGGTTCAGC CCTAGCACTA
CCCGGTGAGG TGACTACGGT TAACGCATCA TTTACCGTGG GTGAGGCTGG GCTTTGGGTT
ATTAGGCTTA ATGGTGACGC GGGGACTAGT AAATTCACTG AGTCAATTAA GGTGAGGGTT
ATTGAGGGGA GGAGGCCGGT TAAATTAGCC TTAGTGTACC ACATGCATCA ACCCCCATGG
TACATGAGTG ACGGCAGGTA TTACGCTGAT TGGGCATTCA GGTACGTTCA TGCCCCGGTT
ATGGCACCCT TCTTCAACGG TGGCCCATAC TTATTCCACG CATTCCTCAA TGACAAGTAC
AGTGGAGTTA AGGTGAATAT TCACTTATCC CCAAGCCTAC TTAAGCAGTG GGTTGATGCC
ATTGAGAAGG GTTATACCCT CATTAATGGT GAAGTCCACG CAAAGGGTAG TGGTGAGGTT
AATGCGGTGG CTAAGGTCCT TGATATGTAT AGGGTTCAGG CTAATAGGGG GCAGTTGGAT
GTATTATCAA GCGTATACGC CCACACCATA CTGGGTTACT TAGCATCAAG GTACGAGATT
ATTGACGTTA TTGATGAGGA ACTGGGCGTG GGTATGGAGG TTACTAAAAG TACCCTGGGT
GTTAATCCCG TTGGTGTTTG GACTCCTGAA ATGGCGTGGA GTATGGAGTT GCTTGACATA
TATGAGAAGC ATAAGGTCGG CTACACTGTG CTTGATGGTG GTAATCACTT CCCTGGGGTT
CAGGGGGATA AGGGGAGTAT TTATGAACCC TATAGCCTGG GTGGTAGGTT AACAGTATTC
TTTAGGGATG AGAGGTTAAG TAACATTTTA TCCTTCCAGA ATAATATCCC TGACGAGAGG
TCTGCGGTGA AGCTTGCCGC AATGCTCAGT AGATCCATTA TTGAGACTAA TGGTGAATTA
GTGGTCATTG CCCTTGATGG TGAGAACTTC ATAGCCATGT CCAAGACCCC GGCCATGGTT
GGTTTAATGC TTGATAAATT CTACTCATAC CTCAGTAGAA TGCAGGAGTT AGGCATTATT
GAGACTGTTA GGCTTAGTCA AGTTAACATG AGTAGGAGAA GCATAACCTA CATACCCACA
ACCTCCTGGT TAGGGGGCTT CACTAAGTGG GATGGAGAGA GGAGGGAGCA TGCAGAGTAC
TGGGTTAAGG TCATTGACTC ATACAGGTAC TTGAGGGGTC TTGAGGATGC ATTGGGTGGT
AAGATTAATG AGGCTAGGTA CGCCCTATGG CATGCCCTAG ACAGTGACTT CTGGTGGGCT
GAGTTCTGGA ATCCTGATTT AATTAACCAT TGGGTTGAGG AGTTCCGCAA TATCCTGGAT
TCAAGGTTCA AGATAGCCAT GAGGCCCCTA AGGGAGGTTT ACAGGGGGCT TGTTAATAGG
CCTATTGATG TGGAATTAGA GTTTGATAAT GACATGGGGG TTAACGTTAA GTTCAAGTTA
ATTTGCCTAG ATACTCAACT GGATGTTGTT ATTCAGCCTG GTTCCTCAAG GATTAAGTGC
AGTATAATAC CTAGGTTAGC CGGTTCCTAT AGGGTACCCA TATTCGTAAC CTCAGGTAAC
TACATTTACC TACAATCCTA CGTAACCCTA AACGTCACCT ACGGTAATAG GGATCCACCT
AATGAGGATT CAGCGGGATA G
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| Protein sequence | MVYVRALLDV DSPVHKVGDE VGVKVRLIND SSSSINVNIT LDYLLEGRHV NSWTGSALAL
PGEVTTVNAS FTVGEAGLWV IRLNGDAGTS KFTESIKVRV IEGRRPVKLA LVYHMHQPPW
YMSDGRYYAD WAFRYVHAPV MAPFFNGGPY LFHAFLNDKY SGVKVNIHLS PSLLKQWVDA
IEKGYTLING EVHAKGSGEV NAVAKVLDMY RVQANRGQLD VLSSVYAHTI LGYLASRYEI
IDVIDEELGV GMEVTKSTLG VNPVGVWTPE MAWSMELLDI YEKHKVGYTV LDGGNHFPGV
QGDKGSIYEP YSLGGRLTVF FRDERLSNIL SFQNNIPDER SAVKLAAMLS RSIIETNGEL
VVIALDGENF IAMSKTPAMV GLMLDKFYSY LSRMQELGII ETVRLSQVNM SRRSITYIPT
TSWLGGFTKW DGERREHAEY WVKVIDSYRY LRGLEDALGG KINEARYALW HALDSDFWWA
EFWNPDLINH WVEEFRNILD SRFKIAMRPL REVYRGLVNR PIDVELEFDN DMGVNVKFKL
ICLDTQLDVV IQPGSSRIKC SIIPRLAGSY RVPIFVTSGN YIYLQSYVTL NVTYGNRDPP
NEDSAG
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