| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1366 |
|---|
| Symbol | |
|---|
| ID | 5710347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1440875 |
|---|
| End bp | 1441837 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275875 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001541182 |
|---|
| Protein GI | 159041930 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGG ATGTGATTTC ACTTGGTGAG CTTATTGCTG AGTTCGTTAG GGTTCATAGA
GGGGTTATGC ATGATGTTGC TGACTTATAC ATGGGTCCAT TCCCAAGTGG TGCACCGGCA
ATAACCATTG ATTCAGCAGC TAGGCTAGGG CTTAATGCGG GTTTCATTGG TGTTGTGGGT
AATGATGACT TTGGACACAT GATAATTAAT AGGCTTAGGA GGGATGGTGT TGATACTCTT
CGTGTGATTA TTGATAATGA TTCAATAACT GGGTTAGCCT TCGTGGCTTA TGATCAATCA
GGTTCAAGGA GATTCGTATT TAACCTCAAG TGGTCTTCAT CAGCTAAATT AACACCAAGT
CTCATTAACC CAGACTACTT TACAGGGGTT AGGGTTCTTC ACGTTTCTGG GTCAACAATG
TATATTGGTA AGGGGCCGAG GGATGCTTGC ATTAAGGCAA TGAGTGAGGC TAGGCGTAGA
GGGGTCTTAG TGTCGTATGA TCCGAATGTG AGGGTTGAGT TAATGAGTAT TAATGATACT
AGGGAATTAT TCCTAAACTC ACTAAGGCTA GTTAACGTAC TCCTCATTAG TGAGGAGGAG
GTTAACGTAT TAATGGGTGG TGGAGGCGCC TTGGAGAATG CCATTAAATT GCTTAATAAG
GGTCCTGAAA TCATTGTTGT TAAGAGAGGC GTTAATGGTT CATTTGCGGT AAGTAGGGGT
AATCAGTACC ATGAGGAGTA TGCCTTTGAG GTTAATGAGG TTGACCCAAC GGGGGCTGGT
GACGTATTTA ATGCAGCCTT CATTTACGGT TACCTGAAGG GCTGGGGGAT TAATCAAATA
CTTAAGTTTG CTAATGCCGC TGCGGCTATT AAGGTGACTA GAATGGGACC CATGGAGGGC
CCTGGCGGCA TTAATGAGGT TCTTGAATTA ATGAGGAAGG GTAAGCAACG CGGCGTTAAG
TGA
|
|---|
| Protein sequence | MNMDVISLGE LIAEFVRVHR GVMHDVADLY MGPFPSGAPA ITIDSAARLG LNAGFIGVVG
NDDFGHMIIN RLRRDGVDTL RVIIDNDSIT GLAFVAYDQS GSRRFVFNLK WSSSAKLTPS
LINPDYFTGV RVLHVSGSTM YIGKGPRDAC IKAMSEARRR GVLVSYDPNV RVELMSINDT
RELFLNSLRL VNVLLISEEE VNVLMGGGGA LENAIKLLNK GPEIIVVKRG VNGSFAVSRG
NQYHEEYAFE VNEVDPTGAG DVFNAAFIYG YLKGWGINQI LKFANAAAAI KVTRMGPMEG
PGGINEVLEL MRKGKQRGVK
|
|---|
| |