| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1355 |
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| Symbol | sdhB |
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| ID | 5708855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1431691 |
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| End bp | 1432455 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275863 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001541171 |
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| Protein GI | 159041919 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAG TTAAGGCAGA TATTAAGATA GAGATTAAGA GGAGGGTGTT CACATTTAGA
GTTAAACGTT ATGACCCTAA GACAAGTGGC TATAAGTGGA GTGAGTATAA GGTTGAGGTT
ACTAATAGGC AGACTGTGCT TGATGCATTA CTTAAAATTA AGGCGACGCA GGATTCAACA
TTAGCTGTAA GGTATAGTTG CAGAATGGGT ATATGCGGTT CCTGCGCAAT GGTAATTAAC
GGTACCCCAC GGTTAGCCTG TGAGACTAAG CCCTTTGAAT TGGGCACTGA TGTAATAACA
GTTGAACCAT TAAGTAACCT TAAGCCAATT AAGGATCTAG TCACGGATAT GGATGAATTC
TTTGAGAAGC ATAAGTCAGT GGACCCATGG TTAATTAGGA AGGATGAGAA GGAGCAGTTT
GAGCAATTAA ACACCTACTA CCCTCAAACT GAGGAACAGT TAGTGAATTA CCTGGAATTC
TCATACTGTA TAAAGTGTGG TGCCTGCTAC GCCGCATGCC CAATGGTTTT CCTGAATAAG
AATTACCTTG GACCGCAGGC ATTGGCGGCC GCCTACAGGT GGAGTGCTGA TAATAGGGAT
GAAGGCTACG TGCTTAGGCT TAAGATTATT GACTCAGATA ATGGAGTGTG GTCATGCCAC
TACAGTGGCA CATGCAGTAA GGTTTGCCCC AAGGGCGTTG ACCCAGCGCT TGCAATAAAC
CTACTGAAGA AATCATTATT AACCGGTAAA CCACCGGCTA GGTGA
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| Protein sequence | MSSVKADIKI EIKRRVFTFR VKRYDPKTSG YKWSEYKVEV TNRQTVLDAL LKIKATQDST
LAVRYSCRMG ICGSCAMVIN GTPRLACETK PFELGTDVIT VEPLSNLKPI KDLVTDMDEF
FEKHKSVDPW LIRKDEKEQF EQLNTYYPQT EEQLVNYLEF SYCIKCGACY AACPMVFLNK
NYLGPQALAA AYRWSADNRD EGYVLRLKII DSDNGVWSCH YSGTCSKVCP KGVDPALAIN
LLKKSLLTGK PPAR
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