| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1341 |
|---|
| Symbol | |
|---|
| ID | 5710023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1416021 |
|---|
| End bp | 1416713 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641275848 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001541157 |
|---|
| Protein GI | 159041905 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000168829 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.809045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTGT TTGGTGTAGT GTTGGCTGCT GGGAGGGGGG AGCGTTTAAG GCCAATTACC
CTCTATGTAC CTAAGCCCTT AATGCCCATT CCAGGGGGTA GGCTTGCAAT GCAAGATGCA
GTGGAGCGTC TGCTTCCGTT AAAGCCTATT AGAATTTACA TTGTTGCCCA TTACATGGCT
GGGTTAATAA TGGATGCTGT TAAGCATTTG AACTTAACTT ATAATGGGTT GCTTGAAACG
GTTATCCACG ATAAGTTACT TGGTACTGCT GGTCACTTAT ACTTTCTAAG TAACTTAGTT
AAGGATGATG ATATTGTTGT GGTTGAGAAT GGTGACGTCA TTGCTGATGT GAATATGGTT
GATGCAGTTA ATTTCCACTT GGGAAAGGGA CTGGATATGA CTATAATTGG GTATAGGGCT
GGTTTCCAAT TGAGGTATGG GGTTCTTGAA ACAGAGGATT ATAATGTGAA GGCTTGGGTT
GAGAAACCCA CTATTAACTT CACTGTGTCG ACAGGCAACT ACATAATTAA GGGTAAGTTA
CTGAGGCTGC TTAACGGTGG CTTTATTGAT ATGAATGATT ACGTTAACTT AATTATAAGG
GAGGGGGGTA GGGTTGGGGT GTATTTAGTC AATAAATTCA TAGACATCGG CACTGTGGAT
GATTACCTAA AGCTTTGGTG CCCTGGGAAG TGA
|
|---|
| Protein sequence | MAVFGVVLAA GRGERLRPIT LYVPKPLMPI PGGRLAMQDA VERLLPLKPI RIYIVAHYMA
GLIMDAVKHL NLTYNGLLET VIHDKLLGTA GHLYFLSNLV KDDDIVVVEN GDVIADVNMV
DAVNFHLGKG LDMTIIGYRA GFQLRYGVLE TEDYNVKAWV EKPTINFTVS TGNYIIKGKL
LRLLNGGFID MNDYVNLIIR EGGRVGVYLV NKFIDIGTVD DYLKLWCPGK
|
|---|
| |