| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1307 |
|---|
| Symbol | |
|---|
| ID | 5708485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1380838 |
|---|
| End bp | 1381440 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275814 |
|---|
| Product | proteasome endopeptidase complex |
|---|
| Protein accession | YP_001541124 |
|---|
| Protein GI | 159041872 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.644154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.454168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC AACTCGAATT AATGACTGGA ACCACGGTTG GTATAAAAGC TAAGGATGGT
GTTGTCCTGG CAGCTGAGAA GAGGGTTTCA TACGGCTTCT ACCTAATGAG TAAGTCAGGT
AAGAAGGTTT ACCCAATAAC TAATAGGATT GGGTTAGCCT CATCAGGTAT TTTAGCTGAT
ATTCAAACAA TAACTAAGGT AATTAGGGCT AATATAGCTA ACATGGAGAT AGAAATGAAG
AGGCCTGTCT CAGTTAGGGC AGCCGCCAAG TTACTGAGCA TAATGCTGTT TCAAAACAAG
TACATGCCCT ACATAGCTGA AACCATGGTT GGTGGTATTG ATGAGGAGGG GCCTAAATTA
TTCATACTTG ACTCATGGGG TTCATTAATT GAGGATGACT TCGCGGCTCT AGGTAATGGC
GCTAGAACAG CCATAGGCCT AATAGAGACA GGTTACTCAA GCAGTATAAC TGTTAAGGAG
GCTAAGGAGT TAGCCATAAA GGCGATTAAG GAGGCTATTG CAAGGGACCC AACCTCAGGG
GATGGTATAG ATACCTTAGT AATAACCGGC AACGGCTACT TAGAGGATTC AATTAAGCTT
TAG
|
|---|
| Protein sequence | MSDQLELMTG TTVGIKAKDG VVLAAEKRVS YGFYLMSKSG KKVYPITNRI GLASSGILAD
IQTITKVIRA NIANMEIEMK RPVSVRAAAK LLSIMLFQNK YMPYIAETMV GGIDEEGPKL
FILDSWGSLI EDDFAALGNG ARTAIGLIET GYSSSITVKE AKELAIKAIK EAIARDPTSG
DGIDTLVITG NGYLEDSIKL
|
|---|
| |