| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1303 |
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| Symbol | |
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| ID | 5708910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1375781 |
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| End bp | 1378051 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275810 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001541120 |
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| Protein GI | 159041868 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000031195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.342253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCTA GGAGGTTAAT GATAATTGAG TTGGCTAGGA GTGATGAGGT CTTATCTAGG
CTACTGGCTG ATAATGGGCA CCAGGTCATA TACGCTAATG TTGAGAATGG GGAGAGGGTG
GAGCCAAGCC TTGATGTTGA TTACGTGAAG CCAAGTGAGC TAGCTAATGC ACTTAAGGCA
ATGGGCATAA GTAGGCTTTA CGAATACCAG TATAAGGCAT ACCTCAGCAT AACTGGGGGG
AGGAACACAA TAATAACGTC AGGTACTGGA ACAGGTAAGA CTGAGGCGTT CCTAATACCC
ATAATCGCCA GGGCCCTTAA CCACAGGAGG GAGGTCATCA TCTACCCAAC CAAGGCCTTA
GCCAGGGATC AGGAATCCAG GTTCAGGGCC TTAGCTGAGC CACTGGGGTT AAGGGTAACC
ACGTATGATG CTGATTCCCC ATCAGAGGTT AGGAGGGGGG TTTACGATGG TGAGTACTCC
CTGGTTTTAA CTAACCCAGA CATGTTGAAT ACGGCTATGA TTCATGTCCC AGCCTTCAGG
AGGTTTATGG CAACTGTGGA TTACGTCACA ATAGATGAGA TCCATGTCTA TAATGGGGTA
CTGGGATCAC ACATGCATTA CTTAATTAAA AGGATTAGGC ACCTCAACCC GGGGGTTAAG
TTCGCTGCAG CATCAGCAAC AATAGGTAAC CCAACCCAGT ACTTCAGTAA CCTAGTGGGC
TCTGAGGTTA CTCACATTGA GGGTATTAGG GGGGTGAGGG GGGAGTTGGT TCACGTAATG
CTTAGGCCAA TTAGGAGGGG GAAGCTCCAG GAGGTTACTA ACCTGGTTAA GCTGTGTATT
GAATTAGGTA GGAAGTGCAT AGTCTTCGCT GATAGCCACT GGATGGTGGA GGTTATTAAG
AGGATGATTA ACTCCATGGG CCTTGGCGGT AAGGTGGCTG TACATAGGGC TGGGTTAAGG
CCTGATGAGA GGAGGAGGGT TGAGGACTCC TTCAAATCCG GTGAACTACA AGCGGTATTA
GCCACACCCA CACTGGAACT GGGTATCGAC ATTGGTGACG CTGACTTCGC AGTAATGGCC
ACTAACCCAC CCAGCTTCAT AAAGTACCTT CAAAGAGCTG GGAGGGTTGG CAGGAGGGGT
CAGAGGGCTT ATGTTATTCA GGTGCTTGGG GATGACCCAA TGAGCACCTA CTACGCCAAC
CACCCTGAGG AATTCTACAA TAGGTCACCT GAACCAATGT TCATGGAGCC TAACAATGAT
GAGGTTGCTG TAAGGCACCT ACTAGCAATG ATTAGGGAAT CAGCGGTTAA GTTAAGTGAA
CTCGACGATT ATTTAAGGGG ACTCGTAAGT GGATTGGTTA ATGAAGGGTT AGTATCCATT
AGGGGTGATA GGGTTTTCCT AACAGAGGAT GGGTTAAGGG TCATTAATTC ATTCAACGTG
ATTAGGGGGA ATGGGGATGT TGTGGTGATT AGGCGTAAGG GAGGTGGGTT AATTGGGTAT
AGGGAGATGC CCATGGCTAT TAAGGAACTT CACCCAGGGG CAATATACAT GCACGGTGGC
TTAACCTATA GGGTTCTTGA ACTAGATGTG AGGCATAGGA GAGCCATAGT GGTTCCTGAG
GATTCAAGTG AATTAATCAC TAAGGCGCTG TATAACAGTA ACCCCACTGT GGTCAATGTT
ATTGAGGAGT CAAGTTACAA GGGTATTCCA ATAAGGTACG CTGTACTTGA TATTGAGGAG
GAGGTGTATG GATACGTGGT TAAGAGGATG AGCAGTAATG AGACCCTTGG TGAATATAGG
TTAAGTGAAC CAATAAGGTA TAGGTTCAGG ACTAAGGGCA TAATACTCAA CATGCCTCCA
GTAAACTTCT CAGCAGTGGA GTTAAGGGAC TTAGTGGAGA AGGGTAAGGC CTACCACGCC
ACTGAACACG TATTAATATC GGCTGGTGAA GTTGTCGCCA ACGCGGCGCC AACAGACATG
GGTGGTATAT CATATCCAAC AGGCCACATT GTAATATATG ACTCATACCC AGGGGGCTCC
GGGGTTACTA AGCTAGTAAT GGAGAGGATT GATAAGGTTA TTGACATAGC CTACAGCATT
GTAACCTCAT GTAATTGTAG GGATGGTTGC CCAAGATGCG TATACTCACC CTACTGTGGT
AATAATAATA GGATGTTGTC ACGCTTAAAC GCAATAAGGG TTCTTGAAGC CGCCTTAAGG
GGGGAGAGGG GTATTGATGA GCCCCCGCCC TTTGAGGGTT CAATACCATG A
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| Protein sequence | MKSRRLMIIE LARSDEVLSR LLADNGHQVI YANVENGERV EPSLDVDYVK PSELANALKA
MGISRLYEYQ YKAYLSITGG RNTIITSGTG TGKTEAFLIP IIARALNHRR EVIIYPTKAL
ARDQESRFRA LAEPLGLRVT TYDADSPSEV RRGVYDGEYS LVLTNPDMLN TAMIHVPAFR
RFMATVDYVT IDEIHVYNGV LGSHMHYLIK RIRHLNPGVK FAAASATIGN PTQYFSNLVG
SEVTHIEGIR GVRGELVHVM LRPIRRGKLQ EVTNLVKLCI ELGRKCIVFA DSHWMVEVIK
RMINSMGLGG KVAVHRAGLR PDERRRVEDS FKSGELQAVL ATPTLELGID IGDADFAVMA
TNPPSFIKYL QRAGRVGRRG QRAYVIQVLG DDPMSTYYAN HPEEFYNRSP EPMFMEPNND
EVAVRHLLAM IRESAVKLSE LDDYLRGLVS GLVNEGLVSI RGDRVFLTED GLRVINSFNV
IRGNGDVVVI RRKGGGLIGY REMPMAIKEL HPGAIYMHGG LTYRVLELDV RHRRAIVVPE
DSSELITKAL YNSNPTVVNV IEESSYKGIP IRYAVLDIEE EVYGYVVKRM SSNETLGEYR
LSEPIRYRFR TKGIILNMPP VNFSAVELRD LVEKGKAYHA TEHVLISAGE VVANAAPTDM
GGISYPTGHI VIYDSYPGGS GVTKLVMERI DKVIDIAYSI VTSCNCRDGC PRCVYSPYCG
NNNRMLSRLN AIRVLEAALR GERGIDEPPP FEGSIP
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